The end-Triassic mass extinction and ocean acidification

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Triassic reef limestones in the Dolomites of northern Italy. Credit: © Matteo Volpone

Four out of six mass extinctions that ravaged life on Earth during the last 300 Ma coincided with large igneous events marked by basaltic flood volcanism. But not all such bursts of igneous activity match significant mass extinctions. Moreover, some rapid rises in the rate of extinction are not clearly linked to peaks in igneous activity. Another issue in this context is that ‘kill mechanisms’ are generally speculative rather than based on hard data. Large igneous events inevitably emit very large amounts of gases and dust-sized particulates into the atmosphere. Carbon dioxide, being a greenhouse gas, tends to heat up the global climate, but also dissolves in seawater to lower its pH. Both global warming and more acidic oceans are possible ‘kill mechanisms’. Volcanic emission of sulfur dioxide results in acid rain and thus a decrease in the pH of seawater. But if it is blasted into the stratosphere it combines with oxygen and water vapour to form minute droplets of sulfuric acid. These form long-lived haze, which reflects solar energy beck into space. Such an increased albedo therefore tends to cool the planet and create a so-called ‘volcanic winter’. Dust that reaches the stratosphere reduces penetration of visible light to the surface, again resulting in cooling. But since photosynthetic organisms rely on blue and red light to power their conversion of CO­2­ and water vapour to carbohydrates and oxygen, these primary producers at the base of the marine and terrestrial food webs decline. That presents a fourth kill mechanism that may trigger mass extinction on land and in the oceans: starvation.

Palaeontologists have steadily built up a powerful case for occasional mass extinctions since fossils first appear in the stratigraphic record of the Phanerozoic Eon. Their data are simply the numbers of species, genera and families of organisms preserved as fossils in packages of sedimentary strata that represent roughly equal ‘parcels’ of time (~10 Ma). Mass extinctions are now unchallengeable parts of life’s history and evolution. Yet, assigning specific kill mechanisms involved in the damage that they create remains very difficult. There are hypotheses for the cause of each mass extinction, but a dearth of data that can test why they happened. The only global die-off near hard scientific resolution is that at the end of the Cretaceous. The K-Pg (formerly K-T) event has been extensively covered in Earth-logs since 2000. It involved a mixture of global ecological stress from the Deccan large igneous event spread over a few million years of the Late Cretaceous, with the near-instantaneous catastrophe induced by the Chicxulub impact, with a few remaining dots and ticks needed on ‘i’s and ‘t’s. Other possibilities have been raised: gamma-ray bursts from distant supernovae; belches of methane from the sea floor; emissions of hydrogen sulfide gas from seawater itself during ocean anoxia events; sea-level changes etc.

The mass extinction that ended the Triassic (~201 Ma) coincides with evidence for intense volcanism in South and North America, Africa and southern Europe, then at the core of the Pangaea supercontinent. Flood basalts and large igneous intrusions – the Central Atlantic Magmatic Province (CAMP) – began the final break-up of Pangaea. The end-Triassic extinction deleted 34% of marine genera. Marine sediments aged around 201 Ma reveal a massive shift in sulfur and carbon isotopes in the ocean that has been interpreted as a sign of acute anoxia in the world’s oceans, which may have resulted in massive burial of oxygen-starved marine animal life. However, there is no sign of Triassic, carbon-rich deep-water sediments that characterise ocean anoxia events in later times. But it is possible that bacteria that use the reduction of sulfate (SO42-) to sulfide (S2-) ions as an energy source for them to decay dead organisms, could have produced the sulfur isotope ‘excursion’. That would also have produced massive amounts of highly toxic hydrogen sulfide gas, which would have overwhelmed terrestrial animal life at continental margins. The solution ofH2S in water would also have acidified the world’s oceans.

Molly Trudgill of the University of St Andrews, Scotland and colleagues from the UK, France, the Netherlands, the US, Norway, Sweden and Ireland set out to test the hypothesis of end-Triassic oceanic acidification (Trudgill, M. and 24 others 2025. Pulses of ocean acidification at the Triassic–Jurassic boundary. Nature Communications, v. 16, article 6471; DOI: 10.1038/s41467-025-61344-6). The team used Triassic fossil oysters from before the extinction time interval. Boron-isotope data from the shells are a means of estimating variations in the pH of seawater. Before the extinction event the average pH in Triassic seawater was about the same as today, at 8.2 or slightly alkaline. By 201 Ma the pH had shifted towards acidic conditions by at least 0.3: the biggest detected in the Phanerozoic record. One of the most dramatic changes in Triassic marine fauna was the disappearance of reef limestones made by the recently evolved modern corals on a vast scale in the earlier Triassic; a so-called ‘reef gap’ in the geological record. That suggests a possible analogue to the waning of today’s coral reefs that is thought to be a result of increased dissolution of CO2 in seawater and acidification, related to global greenhouse warming. Using the fossil oysters, Trudgill et al. also sought a carbon-isotope ‘fingerprint’ for the source of elevated CO2, finding that it mainly derived from the mantle, and was probably emitted by CAMP volcanism. So their discussion centres mainly on end-Triassic ocean acidification as an analogy for current climate change driven by CO2 largely emitted by anthropogenic burning of fossil fuels. Nowhere in their paper do they mention any role for acidification by hydrogen sulfide emitted by massive anoxia on the Triassic ocean floor, which hit the scientific headlines in 2020 (see earlier link).

Sagduction of greenstone belts and formation of Archaean continental crust

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Simplified geological map of the Archaean Yilgarn Craton in Western Australia. Credit: Geological Survey of Western Australia

Every ancient craton seen from space shows patterns that are unique to Archaean continental crust: elongated, ‘canoe-shaped’ greenstone belts enveloped by granitic gneisses, both of which are punctured by domes of younger, less deformed granites. The Yilgarn Craton of Western Australia is a typical granite-greenstone terrain. Greenstone belts contain lavas of ultramafic, basaltic and andesitic compositions, which in undeformed settings show the typical pillow structures formed by submarine volcanic extrusion. There are also layered mafic to ultramafic complexes, formed by fractional crystallisation, minor sedimentary sequences and occasionally more felsic lavas and ashes. The enveloping grey gneisses are dominantly highly deformed tonalite-trondhjemite-granodiorite (TTG) composition that suggest that they formed from large volumes of sodium-rich, silicic magmas, probably generated at depth by partial melting of hydrated basaltic rocks.

The heat producing radioactive isotopes of potassium, uranium and thorium in both the Archaean mantle and crust would have been more abundant before 2.5 Ga ago, because they decay over time. Consequently the Earth’s interior would have then generated more heat than now, gradually to escape by thermal conduction towards the cooler surface. The presence of pillow lavas and detrital sediments in greenstone belts indicate that surface temperatures during the Archaean Eon were below the boiling point of water; in fact probably much the same as in the tropics at present. Indeed there is evidence that Earth was then a water world. It may even have been so during the Hadean, as revealed by the oxygen-isotope data in 4.4 Ga zircon grains. The broad conclusion from such findings is that the Archaean geothermal gradient was much steeper; there would have been a greater temperature increase with depth than now and new crust would have cooled more slowly. Subduction of cool lithosphere would have been less likely than in later times, especially as higher mantle heat production would have generated new crust more quickly. Another likely possibility is that far more heat would have been moved by convection: there would have been more mantle-penetrating plumes and they would have been larger. Large mantle plumes of the Phanerozoic have generated vast ocean floor plateaus, such as the Kerguelen and Ontong Java Plateau.

A group of geoscience researchers at The University of Hong Kong and international colleagues recently completed a geological and geochemical study of the North China Craton, analysing their data in the light of recently emerging views on Archaean processes (Dingyi Zhao et al, A two-stage mantle plume-sagduction origin of Archean continental crust revealed by water and oxygen isotopes of TTGs, Science Advances, v. 11, article eadr9513  ; DOI: 10.1126/sciadv.adr9513).They found compelling evidence that ~2.5 Ga-old Neoarchaean TTG gneisses in the North China granite-greenstone terrain formed by partial melting of an earlier mafic-ultramafic greenstone crust with high water content. They consider this to support a two-stage model for the generation of the North China Craton’s crust above a vast mantle plume. The first stage at around 2.7 Ga was the arrival of the plume at the base of the lithosphere, which partially melted as a result of the decompression of the rising ultramafic plume. The resulting mafic magma created an oceanic plateau partly by underplating the older lithosphere, intruding it and erupting onto the older ocean floor. This created the precursors of the craton’s greenstones, the upper part of which interacted directly with seawater to become hydrothermally altered. They underwent minor partial melting to produce small TTG intrusions. A second plume arriving at ~2.5 Ga resulted in sinking of the greenstones under their own weight to mix or ‘hybridise’ with the re-heated lower crust. This caused the greenstones substantially to partially melt and so generate voluminous TTG magmas that rose as the greenstones subsided. . It seems likely that this dynamic, hot environment deformed the TTGs as they rose to create the grey gneisses so typical of Archaean granite-greenstone terranes. [Note: The key evidence for Dingyi Zhao et al.’s conclusions is that the two TTG pulses yielded the 2.7 and 2.5 Ga ages, and show significantly different oxygen isotope data (δ18O)].

Two stages of TTG gneiss formation in the North China Craton and the sinking (sagduction) of greenstone belts in the second phase. Credit: Dingyi Zhao et al., Fig 4)

Such a petrogenetic scenario, termed sagduction by Dingyi Zhao and colleagues, also helps explain the unique keel-like nature of greenstone belts, and abundant evidence of vertical tectonics in many Archaean terrains (see: Vertical tectonics and formation of Archaean crust; January 2002), Their model is not entirely new, but is better supported by data than earlier, more speculative ideas. That such processes have been recognised in the Neoarchaean – the North China Craton is one of the youngest granite-greenstone terrains – may well apply to far older Archaean continental crust generation. It is perhaps the last of a series of such events that began in the Hadean, as summarised in the previous Earth-logs post.

The world’s oldest crust in the Nuvvuagittuq Greenstone Belt, Quebec

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Since 1999, the rocks generally acknowledged to be the oldest on Earth were part of the Acasta gneisses in the Slave Craton in Canada’s Northwest Territories; specifically the Idiwhaa tonalitic gneisses. Zircons extracted from that unit yielded an age of 4.02 billion years (Ga) using U-Pb radimetric dating, revealing the time of their crystallisation from granitic magma. But nine years later some metabasaltic rocks from the tiny (20 km2) Nuvvuagittuq Greenstone Belt on the eastern shore of Hudson Bay were dated using the Sm-Nd method at almost 4.3 Ga (see: At last, 4.0 Ga barrier broken; November 2008). Taken at face value the metabasaltic rocks seemed to be well within the Hadean Eon (4.6 to 4.0 Ga) and could thus represent primary crust of that antiquity. However, U-Pb dating of zircons from thin sodium-rich granitic rocks (trondhjemites) that intrude them yielded ages no older than about 3.8 Ga. Similar ages emerged from zircons found in metasediments interleaved in the dominant mafic unit. Discrepancies between the two completely different dating methods resulted in the Hadean antiquity of the mafic rocks having been disputed since 2008. It was possible that the Sm-Nd results from the metabasalts may have resulted from the original mafic magmas having inherited a Hadean Sm-Nd isotopic ‘signature’ from their mantle source. That is, they may have been contaminated and could have formed in the early Archaean.

Glacially smoothed outcrops near Inukjuak, Quebec that reveals rocks of the Nuvvuagittuq Greenstone Belt. Credit: Jonathan O’Neil, University of Ottawa

Jonathan O’Neil, now at Ottawa University in Canada, led the first isotopic investigation of the Nuvvuagittuq Greenstone Belt and has engaged in research there ever since. Further field and laboratory studies revealed that the previously dated mafic rocks had been intruded by large, chemically differentiated gabbro sills. A team of geochemists from the University of Ottawa and Carleton University, including O’Neil, has now published isotopic evidence from the intrusions that suggests a Hadean age for their parent magma (C. Sole et al. 2025. Evidence for Hadean mafic intrusions in the Nuvvuagittuq Greenstone Belt, Canada. Science, v. 388, p. 1431-1435. DOI: 10.1126/science.ads8461). The authors used the decay schemes of two radioactive samarium isotopes 147Sm and 146Sm; a significant advance in radiometric dating. The first decays to 143Nd with a half-life of about 1011 years, the second to 142Nd with a much shorter half life of about 108 years. Due to its more rapid decay, in geological terms,146Sm is now much rarer than 147Sm. Consequently, using the short-lived 146Sm-142Nd decay system is technically more difficult than that of the 147Sm-143Nd system. But the team managed to get good results from both the ‘fast’ and the ‘slow’ decay schemes. They tally nicely, yielding ages of 4157 and 4196 Ma.  The gabbros provide a minimum age for the metabasalts that they cut through. The original 4.3 Ga Sm-Nd date for the metabasalts is thus plausible. Sole and colleagues consider the dominant metabasaltic rocks to have formed a primary crust in late Hadean times that was invaded by later mantle-derived mafic magma about 100 Ma later. The granitic rocks that constitute about one third of the Nuvvuagittuq terrain seem to have been generated by partial melting more than 300 Ma later still, during the Palaeoarchaean.

Perhaps similar techniques will now be deployed in granite-greenstone terrains in other cratons. Many of the older ones, generally designated as Palaeoarchaean in age, also contain abundant metamorphosed mafic and ultramafic igneous rocks. Perhaps their origin was akin to those of Nuvvuagittuq; i.e. more Hadean crust may await unmasking. Meanwhile, there seems to be more to discover from Nuvvuagittuq. For instance, some of the rocks suggested to be metasediments interleaved in the metabasalts show intricate banding that resembles products of bacterial mat accumulation in younger terrains. Signs of Hadean life?

Since the first reliable radiometric dating of Archaean rocks in 1971, there has been an element of competition to date the oldest rocks on Earth: to push history back towards the initial formation of the Earth. It is one of the most disputatious branches of Earth history. Rivalry may play a significant part in driving the science, as well as the development of novel dating techniques and the continuing discovery of clearly old relationships using ‘old-fashioned’ relative dating, such as signs of intrusion, unconformities etcetera. But in some cases there is a darker side: the potential for profit. Recently, samples from Nuvvuagittuq appeared for sale on the Internet, priced at $10,000. They may have been collected under the guise of supplying museums by a group that shipped-in mechanical excavators in 2016. Unsurprisingly this angered the local Innuit community of Inukjuak. They were also worried about bona fide collection for scientific research that had left parts of the small, once pristine area somewhat battered, including cultural features such as an inukshuk navigational monument. Their fury at commercial exploitation of their homeland resulted in the community council closing the area to collecting in 2024. I emphasise that this violation of basic geological ethics was by commercial rock collectors and dealers, not academic geologists. The local people are now considering careful issue of research permits so that important research can continue. But further rock collecting may remain banned.

See also: New Research Verifies Northern Canada Hosts Earth’s Oldest Rocks. Scienmag, 26 June 2025; Gramling, C. 2025. Earth’s oldest rocks may be at least 4.16 billion years old. ScienceNews.

PS With many thanks to ‘Piso Mojado’ for alerting me to this paper

Chinese skull confirmed as Denisovan

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For over a century Chinese scientists have been puzzling over ancient human skulls that show pronounced brow ridges. Some assigned them to Homo, others to species that they believe were unique to China. A widely held view in China was that people now living there evolved directly from them, adhering to the ‘Multiregional Evolution’ hypothesis as opposed to that of ‘Out of Africa’. However, the issue might now have been resolved. In the last few years palaeoanthropologists have begun to suspect that these fossilised crania may have been Denisovans, but none had been subject to genetic and proteomic analysis. The few from Siberia and Tibet that initially proved the existence of Denisovans were very small: just a finger bone and teeth.  Out of the blue, teeth in a robust hominin mandible dredged from the Penghu Channel between Taiwan and China yielded protein sequences that matched proteomic data from Denisovan fossils in Denisova Cave and Baishiya Cave in Tibet, suggesting that Denisovans were big and roamed  widely in East Asia. In 2021 a near-complete robust cranium came to light that had been found in the 1930s near Harbin in China and hidden – at the time the area was under Japanese military occupation. It emerged only when its finder revealed its location in 2018, shortly before his death. It was provisionally called Homo longi or ‘Dragon Man’. Qiaomei Fu of the Institute of Vertebrate Paleontology and Paleoanthropology in Beijing and her colleagues have made a comprehensive study of the fossil.

The cranium found near Harbin, China belonged to a Denisovan. Credit: Hebei Geo University

It is at least 146 ka old, probably too young to have been H. erectus, but predates the earliest anatomically modern humans to have reached East Asia from Africa (~60 ka ago). The Chinese scientists have developed protein- and DNA extraction techniques akin to those pioneered at the Max Planck Institute for Evolutionary Anthropology in Leipzig. It proved impossible to extract sufficient ancient nuclear DNA from the cranium bone for definitive genomic data to be extracted, but dental plaque (calculus) adhering around the only surviving molar in the upper jaw did yield mitochondrial DNA. The mtDNA matched that found in Siberian Denisovan remains (Qiaomei Fu et al. 2025. Denisovan mitochondrial DNA from dental calculus of the >146,000-year-old Harbin cranium. Cell, v. 188, p. 1–8; DOI: 10.1016/j.cell.2025.05.040). The bone did yield 92 proteins and 122 single amino acid polymorphisms, as well as more than 20 thousand peptides (Qiaomei Fu and 8 others 2025. The proteome of the late Middle Pleistocene Harbin individual. Science, v. 388: DOI: 10.1126/science.adu9677). Again, these established a molecular link with the already known Denisovans, specifically with one of the Denisova Cave specimens. Without the painstaking research of the Chinese team, Denisovans would have been merely a genome and a proteome without much sign of a body! From the massive skull it is clear that they were indeed big people with brains much the same size as those of living people. Estimates based on the Harbin cranium suggest an individual weighing around 100 kg (220 lb or ~15 stone): a real heavyweight or rugby prop!

The work of Qiaomei Fu and her colleagues, plus the earlier, more limited studies by Tsutaya et al., opens a new phase in palaeoanthropology. Denisovans now have a genome and well-preserved parts of an entire head, which may allow the plethora of ancient skulls from China to be anatomically assigned to the species. Moreover, by extracting DNA from dental plaque for the first time they have opened a new route to obtaining genomic material: dental calculus is very much tougher and less porous than bone.

See also: Curry, A. ‘Dragon Man’ skull belongs to mysterious human relative. 2025. Science, v. 388; DOI: 10.1126/science.z8sb68w. Smith K. 2025. We’ve had a Denisovan skull since the 1930s – only nobody knew. Ars Technica, 18 June 2025. Marshall, M. 2025. We finally know what the face of a Denisovan looked like. New Scientist 18 June 2025.

Detecting oxygenic photosynthesis in the Archaean Earth System

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For life on Earth, one of the most fundamental shifts in ecosystems was the Great Oxygenation Event 2.5 to 2.3 billion years (Ga) ago. The first evidence for its occurrence was from the sedimentary record, particularly ancient soils (palaeosols) that mark exposure of the continental surface above sea level and rock weathering. Palaeosols older than 2.4 Ga have low iron contents that suggest iron was soluble in surface waters, i.e. in its reduced bivalent form Fe2+. Sediments formed by flowing water also contain rounded grains of minerals that in today’s oxygen-rich environments are soon broken down and dissolved through oxidising reactions, for instance pyrite (FeS2) and uraninite (UO2). After 2.4 Ga palaeosols are reddish to yellowish brown in colour and contain insoluble oxides and hydroxides of Fe3+ principally hematite (Fe2O3) and goethite (FeO.OH). After this time sediments deposited by wind action and rivers are similar in colour: so-called ‘redbeds’. Following the GOE the atmosphere initially contained only traces of free oxygen, but sufficient to make the surface environment oxidising. In fact such an atmosphere defies Le Chatelier’s Principle: free oxygen should react rapidly with the rest of the environment through oxidation. That it doesn’t shows that it is continually generated as a result of oxygenic photosynthesis. The CO2 + H2O = carbohydrate + oxygen equilibrium does not reach a balance because of continual burial of dead organic material.

Free oxygen is a prerequisite for all multicelled eukaryotes, and it is probably no coincidence that fossils of the earliest known ones occur in sediments in Gabon dated at 2.1 Ga: 300 Ma after the Great Oxygenation Event. However, the GOE relates to surface environments of that time. From 2.8 Ga – in the Mesoarchaean Era – to the late Palaeoproterozoic around 1.9 Ga, vast quantities of Fe3+ were locked in iron oxide-rich banded iron formations (BIFs): roughly 105 billion tons in the richest deposits alone (see: Banded iron formations (BIFs) reviewed; December 2017). Indeed, similar ironstones occur in Archaean sedimentary sequences as far back as 3.7 Ga, albeit in uneconomic amounts. Paradoxically, enormous amounts of oxygen must have been generated by marine photosynthesis to oxidise Fe2+ dissolved in the early oceans by hydrothermal alteration of basalt lava upwelling from the Archaean mantle. But none of that free oxygen made it into the atmosphere. Almost as soon as it was released it oxidised dissolved Fe2+ to be dumped as iron oxide on the ocean floor. Before the GOE that aspect of geochemistry did obey Le Chatelier!

A limestone made of stromatolites

The only likely means of generating oxygen on such a gargantuan scale from the earliest Archaean onwards is through teeming prokaryote organisms capable of oxygenic photosynthesis. Because modern cyanobacteria do that, the burden of the BIFs has fallen on them. One reason for that hypothesis stems from cyanobacteria in a variety of modern environments building dome-shaped bacterial mats. Their forms closely resemble those of Archaean stromatolites found as far back as 3.7 Ga. But these are merely peculiar carbonate bodies that could have been produced by bacterial mats which deploy a wide variety of metabolic chemistry. Laureline Patry of the Université de Bretagne Occidentale, Plouzané, France, and colleagues from France, the US, Canada and the UK have developed a novel way of addressing the opaque mechanism of Archaean oxygen production (Patry, L.A. and 12 others. Dating the evolution of oxygenic photosynthesis using La-Ce geochronology. Nature, v. 642, p. 99-104; DOI: 10.1038/s41586-025-09009-8).

They turned to the basic geochemistry of rare earth elements (REE) in Archaean stromatolitic limestones from the Superior Craton of northern Canada. Of the 17 REEs only cerium (Ce) is capable of being oxidised in the presence of oxygen. As a result Ce can be depleted relative to its neighbouring REEs in the Periodic Table, as it is in many Phanerozoic limestones. Five samples of the limestones show consistent depletion of Ce relative to all other REE. It is also possible to date when such fractionation occurred using 138La– 138Ce geochronology.  The samples were dated at 2.87 to 2.78 Ga (Mesoarchaean), making them the oldest limestones that show Ce anomalies and thus oxygenated seawater in which the microbial mats thrived. But that is only 300 Ma earlier than the start of the GOE. Stromatolites are abundant in the Archaean record as far back as 3.4 Ga, so it should be possible to chart the link between microbial carbonate mats and oxygenated seawater to a billion years before the GOE, although that does not tell us about the kind of microbes that were making stromatolites.

See also: Tracing oxygenic photosynthesis via La-Ce geochronology. Bioengineer.org, 29 May 2025; Allen, J.F. 2016. A proposal for formation of Archaean stromatolites before the advent of oxygenic photosynthesis. Frontiers in Microbiology, v. 7; DOI: 10.3389/fmicb.2016.01784.

Arsenic: an agent of evolutionary change?

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The molecules that make up all living matter are almost entirely (~98 %) made from the elements Carbon, Hydrogen, Oxygen, Nitrogen and Phosphorus (CHONP) in order of their biological importance. All have low atomic numbers, respectively 6th, 1st, 8th, 7th and 15th in the Periodic Table. Of the 98 elements found in nature, about 7 occur only because they form in the decay schemes of radioactive isotopes. Only the first 83 (up to Bismuth) are likely to be around ‘for ever’; the fifteen heavier than that are made up exclusively of unstable isotopes that will eventually disappear, albeit billions of years from now. There are other oddities that mean that the 92 widely accepted  to be naturally occurring is not strictly correct. That CHONP are so biologically important stems partly from their abundances in the inorganic world and also because of the ease with which they chemically combine together. But they are not the only ones that are essential.

About 20 to 25% of the other elements are also literally vital, even though many are rare. Most of the rest are inessential except in vanishingly small amounts that do no damage, and may or may not be beneficial. However some are highly toxic. Any element can produce negative biological outcomes if above certain levels. Likewise, deficiencies can result in ill thrift and event death. For the majority of elements, biologists have established concentrations that define deficiency and toxic excess. The World Health Organisation has charted the maximum safe levels of elements in drinking water in milligrams per litre. In this regard, the lowest safe level is for thallium (Tl) and mercury (Hg) at 0.002 mg l-1.Other highly toxic elements are cadmium (Cd) (0.003 mg l-1), then arsenic (As) and lead (Pb) (0.01 mg l-1) that ‘everyone knows’ are elements to avoid like the plague. In nature lead is very rarely at levels that are unsafe because it is insoluble, but arsenic is soluble under reducing conditions and is currently responsible for a pandemic of related ailments, especially in the Gangetic plains of India and Bangladesh and similar environments worldwide.

Biological evolution has been influenced since life appeared by the availability, generally in water, of both essential and toxic elements. In 2020 Earth-logs summarised a paper about modern oxygen-free springs in Chile in which photosynthetic purple sulfur bacteria form thick microbial mats. The springs contain levels of arsenic that vary from high in winter to low in summer. This phenomenon can only be explained by some process that removes arsenic from solution in summer but not in winter. The purple-bacteria’s photosynthesis uses electrons donated by sulfur, iron-2 and hydrogen – the spring water is highly reducing so they thrive in it. In such a simple environment this suggested a reasonable explanation: the bacteria use arsenic too. In fact they contain a gene (aio) that encodes for such an eventuality. The authors suggested that purple sulfur bacteria may well have evolved before the Great Oxygenation Event (GOE). They reasoned that in an oxygen-free world arsenic, as well as Fe2+ would be readily available in water that was in a reducing state, whereas oxidising conditions after the GOE would suppress both: iron-2 would be precipitated as insoluble iron-3 oxides that in turn efficiently absorb arsenic (see: Arsenic hazard on a global scale, May 2020).

Colour photograph and CT scans of Palaeoproterozoic discoidal fossils from the Francevillian Series in Gabon. (Credit: El Albani et al. 2010; Fig. 4).

A group of geoscientists from France, the UK, Switzerland and Austria have investigated the paradox of probably high arsenic levels before the GOE and the origin and evolution of life during the Archaean  (El Khoury et al. 2025. A battle against arsenic toxicity by Earth’s earliest complex life forms. Nature Communications, v. 16, article 4388; DOI: 10.1038/s41467-025-59760-9). Note that the main, direct evidence for Archaean life are fossilized microbial mats known as stromatolites, some palaeobiologists reckoning they were formed by oxygenic photosynthesising cyanobacteria others favouring the purple sulfur bacteria (above). The purple sulfur bacteria in Chile and other living prokaryotes that tolerate and even use arsenic in their metabolism clearly evolved that potential plus necessary chemical defence mechanisms, probably when arsenic was more available in the anoxic period before the GOE. Anna El Khoury and her colleagues sought to establish whether or not eukaryotes evolved similar defences by investigating the earliest-known examples; the 2.1 Ma old Francevillian biota of Gabon that post-dates the GOE. They are found in black shales, look like tiny fried eggs and are associated with clear signs of burrowing. The shales contain steranes that are breakdown products of steroids, which are unique to eukaryotes.

The fossils have been preserved by precipitation of pyrite (Fe2S) granules under highly reducing conditions. Curiously, the cores of the pyrite granules in the fossils are rich in arsenic, yet pyrite grains in the host sediments have much lower As concentrations. The latter suggest that seawater 2.1 Ma ago held little dissolved arsenic as a result of its containing oxygen. The authors interpret the apparently biogenic pyrite’s arsenic cores as evidence of the organism having sequestered As into specialized compartments in their bodies: their ancestors must have evolved this efficient means of coping with significant arsenic stress before the GOE. It served them well in the highly reducing conditions of black shale sedimentation. Seemingly, some modern eukaryotes retain an analogue of a prokaryote As detoxification gene.

How the earliest continental crust may have formed

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Detrital zircon grains extracted from sandstones deposited ~3 billion year (Ga) ago in Western Australia yield the ages at which these grains crystallised. The oldest formed at about 4.4 Ga; only 150 Ma after the origin of the Earth (4.55 Ga). Various lines of evidence suggest that they originally crystallized from magmas with roughly andesitic compositions, which some geochemists suggest to have formed the first continental crust (see: Zircons and early continents no longer to be sneezed at; February 2006). So far, no actual rocks of that age and composition have come to light. The oldest of these zircon grains also contain anomalously high levels of 18O, a sign that water played a role in the formation of these silicic magmas. Modern andesitic magmas – ultimately the source of most continental crust – typically form above steeply-dipping subduction zones where fluids expelled from descending oceanic crust encourage partial melting of the overriding lithospheric mantle. Higher radiogenic heat production in the Hadean and the early Archaean would probably have ensured that the increased density of later oceanic lithosphere needed for steep subduction could not have been achieved. If subduction occurred at all, it would have been at a shallow angle and unable to exert the slab-pull force that perpetuated plate tectonics in later times (see: Formation of continents without subduction, March, 2017).

Landsat image mosaic of the Palaeoarchaean granite-greenstone terrain of the Pilbara Craton, Western Australia. Granite bodies show as pale blobs, the volcanic and sedimentary greenstone belts in shades of grey.

Geoscientists have been trying to resolve this paradox for quite a while. Now a group from Australia, Germany and Austria have made what seems to be an important advance (Hartnady, M. I. H and 8 others 2025. Incipient continent formation by shallow melting of an altered mafic protocrust. Nature Communications, v. 16, article 4557; DOI: 10.1038/s41467-025-59075-9). It emerged from their geochemical studies of rocks in the Pilbara Craton of Western Australia that are about a billion years younger than the aforementioned ancient zircon grains. These are high-grade Palaeoarchaean metamorphic rocks known as migmatites that lie beneath lower-grade ‘granite-greenstone’ terrains that dominate the Craton, which Proterozoic deformation has forced to the surface. Their bulk composition is that of basalt which has been converted to amphibolite by high temperature, low pressure metamorphism (680 to 730°C at a depth of about 30 km). These metabasic rocks are laced with irregular streaks and patches of pale coloured rock made up mainly of sodium-rich feldspar and quartz, some of which cut across the foliation of the amphibolites. The authors interpret these as products of partial melting during metamorphism, and they show signs of having crystallised from a water-rich magma; i.e. their parental basaltic crust had been hydrothermally altered, probably by seawater soon after it formed. The composition of the melt rocks is that of trondhjemite, one of the most common types of granite found in Archaean continental crust. Interestingly, small amounts of trondhjemite are found in modern oceanic crust and ophiolites.

A typical migmatite from Antarctica showing dark amphibolites laced with quartzofeldspathic products of partial melting. Credit: Lunar and Planetary Laboratory, University of Arizona

The authors radiometrically dated zircon and titanite (CaTiSiO₅) – otherwise known as sphene – in the trondhjemites, to give an age of 3565 Ma. The metamorphism and partial melting took place around 30 Ma before the overlying granite-greenstone assemblages formed. They regard the amphibolites as the Palaeoarchaean equivalent of basaltic oceanic crust. Under the higher heat production of the time such primary crust would probably have approached the thickness of that at modern oceanic plateaux, such as Iceland and Ontong-Java, that formed above large mantle plumes. Michael Hartnady and colleagues surmise that this intracrustal partial melting formed a nucleus on which the Pilbara granite-greenstone terrain formed as the oldest substantial component of the Australian continent. The same nucleation may have occurred during the formation of similar early Archaean terrains that form the cores of most cratons that occur in all modern continents.

Impact debris in Neoproterozoic sediments of Scotland and biological evolution?

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False-colour electron microscope image of a shocked grain of zircon recovered from the Stac Fada Member. The red and pink material is a high-pressure polymorph of zircon, arranged in shock lamellae. Zircon is rendered in cyan, some of which is in granulated form. Credit: Kirkland et al. 2025, Fig 2C

Judging by its content of shards and spherules made of murky green glass, one of the lowest units in the Torridonian continental sediments of NW Scotland had long been regarded as simply red sandstone that contained volcanic debris. This Stac Fada Member was thus celebrated as the only sign of a volcanic contribution to a vast thickness (up to 2.5 km) of Neoproterozoic lake and fluviatile sediments. Current flow indicators suggested that the Torridonian was laid down by large alluvial fans derived by erosion of much older crystalline basement far to what is today the west. That is, the Archaean core of the ancient continent of Laurentia, now the other side of the North Atlantic. In 2002 more sophisticated sedimentological and geochemical analysis of the Stac Fada Member revealed a surprise: it contains anomalously elevated platinum-group elements, quartz grains that show signs of shock and otherworldly chromium isotope concentrations. The 10 m thick bed is made from ejecta, perhaps from a nearby impact crater to the WNW concluded from brittle fractures that may have been produced by the impact. Some idea of its age was suggested by Ar-Ar dating of feldspar crystals (~1200 Ma) believed to have formed authigenically in the hot debris. Being the only decent impactite known in Britain, it continues to attract attention.

A group of geoscientists from Western Australia, NASA and the UK, independent of the original discoverers, have now added new insights ( Kirkland, C.L. and 12 others 2025. A one-billion-year old Scottish meteorite impact. Geology, v. 53, early online publication; DOI: 10.1130/G53121.1). They dated shocked zircon grains using U-Pb analyses at 990 ± 22 Ma; some 200 Ma younger than the previously dated, authigenic feldspars.  Detrital feldspar grains in the Stac Fada Member yield Rb-Sr radiometric ages of 1735 and 1675, that are compatible with Palaeoproterozoic granites in the underlying Lewisian Gneiss Complex.

Photomicrograph of Bicellum brazieiri: scale bar = 10μm; arrows point to dark spots that may be cell nuclei (credit: Charles Wellman, Sheffield University)

In a separate publication (Kirkland, C.L et al 2025. 1 billion years ago, a meteorite struck Scotland and influenced life on Earth. The Conversation, 29 April 2025) three of the authors take things a little further, as their title suggests. In this Conversation piece they ponder, perhaps unwarily, on the spatial and temporal association of the indubitable impact with remarkably well-preserved spherical fossils found in Torridonian lake-bed sediments (Bicellum brasieri, reported in Earth-logs in May 2021), which are the earliest-known holozoan animal ancestors. The Torridonian phosphatic concretions in which these important fossils were found at a different locality are roughly 40 Ma younger than the Stac Fada impactite. The authors of the Conversation article appeal to the residual thermal effect of the impact as a possible driver for the appearance of these holozoan organisms. Whether a residual thermal anomaly would last long enough for them to evolve to this biological status would depend on the magnitude of the impact, of which we know nothing.  Eukaryote fossils are known from at least  650 Ma older sedimentary rocks in northern China and perhaps as far back as 2.2 Ga in a soil that formed in the Palaeoproterozoic of South Africa. Both the Torridonian organism and impactite were found in a small area of fascinating geology that has been studied continuously in minute detail since Victorian times, and visited by most living British geologists during their undergraduate days. Ideas will change as curiosity draws geologists and palaeobiologists to less-well studied sites of Proterozoic antiquity, quite possibly in northern China.

A fully revised edition of Steve Drury’s book Stepping Stones: The Making of Our Home World can now be downloaded as a free eBook

A sign of life on another planet? Should we be excited?

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Judging by the coverage in the media, there is huge excitement about a possible sign of life on a very distant planet. It emerged from a Letter to The Astrophysical Journal posted by a British-US team of astronomers led by Nikku Madhusudhan that was publicised by the Cambridge University Press Office (Madhusudhan, N.et al. 2025. New Constraints on DMS and DMDS in the Atmosphere of K2-18 b from JWST MIRI. The Astrophysical Journal, v. 983, article adc1c8; DOI: 10.3847/2041-8213/adc1c8). K2-18 b is a planet a bit smaller than Neptune that orbits a red dwarf star (K2-18) about 124 light years away. The planet was discovered by NASA’s now-defunct Kepler space telescope tasked with the search for planets orbiting other stars. An infrared spectrometer on the Hubble Space Telescope revealed in 2019 that the atmosphere of K2-18 b contained water vapour, making the planet a target for further study as it may possess oceans. The more sophisticated James Webb Space Telescope IR spectrometer was trained on it a year later to reveal methane and CO2: yet more reason to investigate more deeply, for water and carbon compounds imply both habitability and the potential for life forms being there.

The latest results suggest that that the atmosphere of K2-18 b may contain simple carbon-sulfur gases: dimethyl sulfide ((CH3)2S) and dimethyl disulfide (CH3SSCH3). Bingo! for exobiologists, because on Earth both DMS and DMDS are only produced by algae and bacteria. Indeed they are responsible for the odour of the seaside. They became prominent in 1987 when biogeochemist James Lovelock fitted them into his Gaia Hypothesis. He recognised that they encourage cloud formation and thus increase Earth’s reflectivity (albedo) and also yield sulfuric acid aerosols in the stratosphere when they oxidise: that too increases albedo. DMS generates a cooling feedback loop to counter the warming feedback of greenhouse emissions. That is an idea of planetary self-regulation not much mentioned nowadays. Such gases were proposed by Carl Sagan as unique molecular indicators that could be used to search for extraterrestrial life.

The coma of Comet Churyumov-Gerasimenko yielded both dimethyl sulfide and amino acids to the mass spectrometer carried by ESA’s Rosetta. Credit: ESA.

The discovery of possible DMS and DMDS in K2-18 b’s atmosphere is, of course, currently under intense scientific scrutiny. For a start, the statistics inherent in Madhusudhan et al.’s methodology (3σ or 99.7% probability) fall short of the ‘gold standard’ for discoveries in physics (5σ or 99.99999% probability). Moreover, there’s also a chance that exotic, inorganic chemical processes could also create the gases, such as lightning in an atmosphere containing C, H and S. But this is not the first time that DMS has been discovered in an extraterrestrial body. Comets, having formed in the infancy of the Solar System much further from the Sun than any planets, are unlikely to be ‘teeming with life’. The European Space Agency’s Rosetta spacecraft chased comet 67P/Churyumov-Gerasimenko for 2 years, directly sampling dust and gas that it shed while moving closer to the Sun. A single day’s data from Rosetta’s mass spectrometer showed up DMS, and also amino acids. Both could have formed in comets or interstellar dust clouds by chemistry driven by radiation, possibly to contaminate planetary atmospheres. Almost certainly, further remote sensing of K2-18 b will end up with five-sigma precision and some will say, ‘Yes, there is life beyond Earth!’ and celebrate wildly. But that does not constitute proof, even by the ‘weight of evidence’ criterion of some judiciaries. To me such a conclusion would be unseemly romanticism. Yet such is the vastness of the material universe and the sheer abundance of the elements C H O N and P that make up most living matter that life elsewhere, indeed everywhere, (but not life as we know it) is a near certainty. The issue of intelligent lifeforms ‘out there’ is, however, somewhat less likely to be resolved . . .

Middle Palaeolithic Neanderthals and Denisovans of East Asia

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During the Middle Palaeolithic (250 to 30 ka) anatomically modern humans (AMH) and Neanderthals were engaged in new technological developments in Europe and Africa as well as in migration and social interaction. This is reflected in the tools that they left at occupation sites and the fact that most living non-Africans carry Neanderthal DNA. One of the major cultural developments was a novel means of manufacturing stone implements. It developed from the Levallois technique that involved knapping sharp-edged flakes of hard rock from larger blocks or cores. A type of tool first found at a Neanderthal site near La Quina in France is a thick flake of stone with a broad, sharp edge that shows evidence of having been resharpened many times. Most other flake tools seem to have been ‘one-offs’ that were discarded after brief usage. The Quina version was not only durable but seems to have been multipurpose. Analysis of wear patterns on the sharpened edges suggest that they were deployed in carving wood and bone, removing fat and hair from animal hides, and butchery. Such scrapers have been found over a wide area of Europe, the Middle East and NE Asia mostly at Neanderthal sites, including the famous Denisova Cave of southern Siberia that yielded the first Denisovan DNA as well as that of Neanderthals.

Making a typical Quina scraper and related tools. The toolmaker would flake pieces of stone off the core and then carefully shape the Quina scraper. (Image credit: Pei-Yuan Xiao)

Until now, the early humans of East Asia were thought not to have proceeded beyond more rudimentary tools during the Middle Palaeolithic: in fact that archaeological designation hasn’t been applied there. Recent excavations at Longtan Cave in south-west China have forced a complete revision of that view (Ruan, Q.-J., et al. 2025. Quina lithic technology indicates diverse Late Pleistocene human dynamics in East Asia. Proceedings of the National Academy of Sciences, v. 122, article e2418029122; DOI: 10.1073/pnas.2418029122). The Longtan site has yielded more than fifty scrapers and the cores from which they had been struck that clearly suggest the Quina technology had been used there. They occur in cave sediments dated at between 60 and 50 ka. As yet, no human remains have been found in the same level at Longtan, although deeper levels dated at 412 ka have yielded hominin crania, mandibular fragments, and teeth, that have been suggested to be Homo erectus.

Quina type tools in East Asia may previously have been overlooked at other hominin sites in China: re-examination of archived tool collections may show they are in fact widespread. The technology could have been brought in by migrating Neanderthals, or maybe it was invented independently by local East Asian hominins. Because most living people in China carry Denisovan DNA in the genomes so perhaps that group developed the technique before interbreeding with AMH immigrants from the west. Indeed there is no reason to discard the notion that  early AMH may have imported the Quina style. A lot of work lies ahead to understand this currently unique culture at Longtan Cave. However, interpretation of another discovery published shortly after that from Longtan has spectacularly ‘stolen the thunder’ of the Qina tools, and it was made in Taiwan …

Right (top) and downward (lower) views of the partial Penghu mandible. Credit: Yousuke Kaifu University of Tokyo, Japan and Chun-Hsiang Chang Tunghai University, Taichung, from Tsutaya et al. Fig. 1 (inset)Taiwan.

About 10 years ago, Taiwanese fishers trawling in the Penghu Channel between Taiwan and China were regularly finding bones in their nets. Between 70 to 10 ka and 190 to 130 ka ago much lower sea level due to continental ice cap formation exposed the Penghu seabed. Animals and humans were thus able to move between the East Asian mainland and what is now Taiwan. The bones brought to the surface included those of elephants, water buffaloes and tigers, but one was clearly a human lower jawbone (mandible). Its shape and large molar teeth are very different from modern human mandibles and molars. A multinational team from Japan, Denmark, Taiwan and Ireland has extracted proteins from the mandible to check its genetic affinities (Tsutaya, T. and 14 others 2025. A male Denisovan mandible from Pleistocene Taiwan. Science, v. 388, p. 176-180; DOI: 10.1126/science.ads3888). Where DNA has not been preserved in bones proteomics is a useful tool, especially if results are matched with other bones that have yielded both DNA and protein sequences. In the case of the Penghu mandible, proteins from its teeth matched those of Denisovans from the Denisova Cave in Siberia which famously yielded the genome of this elusive human group. They also matched proteins from a rib found in Tibet associated with Denisovan mitochondrial DNA in cave sediments that enclosed the bones.

The three sites (Denisova, Baishiya Cave in Tibet and Penghu Channel) that have produced plausible Denisovan specimens span a large range of latitudes and altitudes. This suggests that Denisovans were capable of successful subsistence across much of East Asia. The Penghu mandible and teeth are similar to several hominin specimens from elsewhere in China that hitherto have been attributed to H. erectus. Apart from the Denisovan type locality, most of the sites have yet to be accurately dated. Having been immersed in sea water for thousands of years isotopes used in dating have been contaminated in the Panghu specimen. It can only be guessed to have lived when the seabed from which it was recovered was dry land; i.e. between 70 to 10 ka and 190 to 130 ka. China was undoubtedly occupied by Homo erectus during the early Pleistocene, but much younger fossils have been attributed to that species by Chinese palaeoanthropologists. Could it be that they are in fact Denisovans? Maybe such people independently developed the Quina knapping technique

See also: Marwick, B. 2025.  Unknown human species in East Asia used sophisticated tools at the same time Neanderthals did in Europe. Live Science, 31 March 2025; Ashworth. J. 2025. Denisovan jawbone helps to reveal appearance of ancient human species. Natural History Museum News 11 April 2025.

A fully revised edition of Steve Drury’s book Stepping Stones: The Making of Our Home World can now be downloaded as a free eBook