Geobiology, palaeontology, and evolution

Pterosaurs had feathers and fur

Published on December 27, 2018May 13, 2019 by zooks777Leave a comment

Pterosaurs, which include the pterodactyls and pteranodons, were the first vertebrates to achieve proper, flapping flight. In the popular imagination they are regarded as ‘flying dinosaurs’, whereas the anatomy of the two groups is significantly different. The first of them appeared in the Upper Triassic around 235 Ma ago, at roughly the same time as the earliest known dinosaurs. The anatomical differences make it difficult to decide on a common ancestry for the two. But detailed analysis of pterosaur anatomy suggests that they share enough features with dinosaurs, crocodiles and birds for all four groups to have descended from ancestral archosaurs that were living in the early Triassic, and they survived the mass extinction at the end of that Period. Birds, on the other hand, first appear in the fossil record during the Upper Jurassic 70 Ma later than pterosaurs. They are now widely regarded as descendants of early theropod dinosaurs, which are known commonly to have had fur and feathers.

Pterosaurs leapt into the public imagination in the final chapter of Sir Arthur Conan Doyle’s Lost World with a clatter of ‘dry, leathery wings’ as Professor George Challenger’s captive pterodactyl from northern Brazil’s isolated Roraima tepui plateau made its successful bid for escape from a Zoological Institute meeting in Queens Hall. Yet, far from being leathery, pterosaurs turned out, in the late 1990’s, to have carried filamentous pycnofibres akin to mammalian hair. Widespread reports in the world press during the week before Christmas in 2018 hailed a further development that may have rescued pterosaurs from Conan Doyle’s 1912 description before it sprang from its perch:

It was malicious, horrible, with two small red eyes as bright as points of burning coal. Its long, savage mouth, which it held half-open, was full of a double row of sharp-like teeth. Its shoulders were humped, and round them was draped what appeared to be a faded grey shawl. It was the devil of our childhood in person.

Two specimens from the Middle to Upper Jurassic Yanliiao lagerstätte in China show far more (Yang, Z. and 8 others 2018. Pterosaur integumentary structures with complex feather-like branching. Nature Ecology & Evolution, v. 3, p. 24-30; DOI: 10.1038/s41559-018-0728-7). Their pycnofibres show branching tufts, similar to those found in some theropods dinosaurs, including tyrannosaurs. They also resemble mammalian underfur fibres, whose air-trapping properties provide efficient thermal insulation. Both body and wings of these pterosaurs are furry, which the authors suggest may also have helped reduce drag during flight, while those around the mouth may have had a sensory function similar to those carried by some living birds. Moreover, some of the filaments contain black and red pigments.

407458aa.2 — Artist’s impression of a Jurassic anurognathid pterosaur from China (Credit: Yang et al 2018; Fig. 4)

Pterosaurs may have independently developed fur and feathers; a case of parallel evolution in response to similar evolutionary pressures facing dinosaurs, birds and mammals. Alternatively, they may have had a deep evolutionary origin in the common ancestors of all these animal groups as far back as the Upper Carboniferous and Lower Permian.

Related articles: Nature Editorial 2018. Fur and fossils. Nature, v. 564, p. 301-302; DOI: 10.1038/d41586-018-07800-4; King, A. 2018. Pterosaurs sported feathers, claim scientists (The Scientist); Conniff, R. 2018. Pterosaurs just keep getting weirder (Scientific American); New discovery pushes origin of feathers back by 70 million years (Science Daily)

Oceanic hydrothermal vents and the origin of life

Published on November 9, 2018 by zooks777Leave a comment

A range of indirect evidence has been used to suggest that life originated deep in the oceans around hydrothermal vents, such as signs of early organic matter in association with Archaean pillow lavas. One particularly persuasive observation is that a number of proteins and other cell chemicals are constructed around metal sulfide groups. Such sulfides are common around hydrothermal ‘smokers’ associated with oceanic rift systems. Moreover, Fischer-Tropsch reactions between carbon monoxide and hydrogen produce quite complex hydrocarbon molecules under laboratory conditions. Such hydrogenation of a carbon-bearing gas requires a catalyst, a commonly used one being chromium oxide (see Abiotic formation of hydrocarbons by oceanic hydrothermal circulation May 2004). It also turns out that fluids emitted by sea-floor hydrothermal systems are sometimes rich in free hydrogen, formed by the breakdown of olivine in ultramafic rocks to form hydroxylated minerals such as serpentine and talc. The fact that chromium is abundant in ultramafic rocks, in the form of its oxide chromite, elevates the possibility that Fischer-Tropsch reactions may have been a crucial part of the life-forming process on the early Earth. What is needed is evidence that such reactions do occur in natural settings.

One site on the mid-Atlantic ridge spreading centre, the Lost City vent field, operates because of serpentinisation of peridotites exposed on the ocean floor, to form carbonate-rich plumes and rocky towers; ‘white smokers’. So that is an obvious place to test the abiotic theory for the origin of life. Past analyses of the vents have yielded a whole range of organic molecules, including alkanes, formates, acetates and pyruvates, that are possible precursors for such a natural process. Revisiting Lost City with advanced analytical techniques has taken the quest a major step forward (Ménez, B. et al. 2018. Abiotic synthesis of amino acids in the recesses of the oceanic lithosphere. Nature, advance online publication; DOI: 10.1038/s41586-018-0684-z). The researchers from France and Kazakhstan focused on rock drilled from 170 m below the vent system, probably beyond the influence of surface contamination from living organisms. Using several methods they detected the nitrogen-containing amino acid tryptophan, and that alone. Had they detected other amino acids their exciting result would have been severely tempered by the possibility of surface organic contamination. The formation of tryptophan implies that its abiotic formation had to involve the reduction of elemental nitrogen (N₂) to ammonia (NH₃). Bénédicte Ménez and colleagues suggest that the iron-rich clay saponite, which is a common product of serpentine alteration at low temperatures, may have catalysed such reduction and amino-acid synthesis through Friedel–Crafts reactions. Fascinating as this discovery may be, it is just a step towards confirming life’s abiogenesis. It also permits speculation that similar evidence may be found elsewhere in the Solar System on rocky bodies, such as the moons Enceladus and Europa that orbit Saturn and Jupiter respectively. That is, if the rock base of hydrothermal systems thought to occur there can be reached.

Related article: Baross, J.A. 2018. The rocky road to biomolecules. Nature, v. 564, p. 42-43; DOI: 10.1038/d41586-018-07262-8.

Neanderthal Mum meets Denisovan Dad

Published on August 23, 2018 by zooks777Leave a comment

Two bone fragments from the Denisova Cave – the former abode of an 18^th century Russian hermit called Denis – in the Altai region of Siberia yielded ancient DNA. One matches that from previously analysed Neanderthal remains and the other a genome that could only be ascribed to a hitherto unknown ancient-human population, now known as the Denisovans. Since their discovery further analysis of both modern and ancient DNA has shown that modern humans living outside of Africa contain a few percent of DNA from both ancient-human groups. Soon after leaving Africa some of their ancestors interbred with both; indeed a 40 ka-old modern-human jaw from Romania revealed genetic evidence that the individual had a Neanderthal great-great grandparent. Their descendants spread far and wide to populate Eurasia, Australasia and the Americas. Using the ancient DNA to peer back in time suggests that Neanderthals and Denisovans diverged from a common ancestor between 470 and 380 ka, itself having split from modern-human ancestry between 770 to 550 ka. Denisovan DNA also contains evidence that its ancestry included segments that could only have come from a totally unknown hominin species. Interestingly, DNA from the Neanderthal bone fragment found at Denisova contains fragments from an anatomically modern-human.

With such riches from tiny fragments of human bones unearthed from the Denisova Cave, it is no surprise that the team led by Svante Pääbo at the Max Planck Institute for Evolutionary Anthropology in Leipzig, Germany, has subsequently analysed others that showed signs of human proteins. The latest ‘takes the biscuit’. A fragment of limb bone from someone who was at least 13 years old yielded DNA commensurate with their having been the child of a Neanderthal mother and a Denisovan father (Slon, V. and 18 others 2018. The genome of the offspring of a Neanderthal mother and a Denisovan father. Nature, v. 560, published on-line; doi: 10.1038/s41586-018-0455-x). Their child was a girl, who has been nicknamed ‘Denny’ by the team, though ‘Denise’ might seem more appropriate. The only clues to what her father, or any Denisovan, might have looked like stem from a few teeth and a skull fragment from the cave that have yielded Denisovan DNA. The teeth are much larger and the skull fragment is thicker than those of Neanderthals, suggesting that Denisovans were distinctly bigger and more robust than even the sturdy Neanderthals.

The father came from a population related to a later Denisovan found in the cave – the first to be sequenced. This suggests long-term occupancy of the area by Denisovans. But his genome also carries traces of Neanderthal ancestry. Surprisingly, the mother is more closely related to Croatian Neanderthals, rather than to an earlier Neanderthal found in the cave. Neanderthals were clearly capable of migrating between Europe and eastern Eurasia; more than 5000 km in this case. Even though very few archaic humans have been genetically sequenced it is beginning to look as if genetic mixing between diverse hominin groups in the last half million years was common, when they actually met. A custom of marrying outside a closely related group (exogamy) has been popular throughout recorded history; indeed it makes sound genetic sense. With the tiny human population density during the Late Pleistocene, it may then have been cause for mutual celebration. As documented in Chapters 2 and 3 of David Reich’s Who We Are and How We Got Here (Oxford University Press, 2018) human origins since about 470 ka until the present chart a history of episodic migrations and genetic mixing that certainly makes nonsense of earlier ideas of ‘racial purity’ and casts doubt even on the term ‘species’ as regards members of the genus Homo.

If we are ever to discover who the Denisovans were and what they looked like, the evidence is likely to come from East Asia at latitudes where climate favours preservation of DNA. Advanced sequencing equipment and techniques are now operational in China, where suspected Denisovan remains have been found

See also: Warren, M. 2018. First ancient-human hybrid. Nature, v. 560, p. 417-418; doi: 10.1038/d41586-018-06004-0); Sample, I. 2018. Offspring of Neanderthal and Denisovan identified for first time. The Guardian (22 August 2918).

A revised and updated edition of Steve Drury’s book Stepping Stones: The Making of Our Home World can now be downloaded as a free eBook

A hint of life on Mars

Published on June 20, 2018 by zooks777Leave a comment

We can be certain that life was around on Planet Earth around 3.5 billion years ago, if not before, because unmetamorphosed sedimentary rocks of that age from Western Australia in which stromatolites occur contain a black to brownish, structureless material known as kerogen. The material is a hodgepodge of organic compounds that form during the breakdown of proteins and carbohydrates in living matter. It is the source material for petroleum compounds when kerogen-rich rocks are heated during burial. The vast bulk of organic compounds preserved on Earth are in the form of ancient kerogen, whose mass exceeds that of the living biosphere by about 10 thousand times. A good sign that it does represent ancient life lies in sedimentary kerogen’s depletion in ‘heavy’ ¹³C compared with ¹²C (negative values of δ¹³C), because in metabolising carbon dioxide living cells preferentially use the lighter of these two isotopes. Conceivably, ¹³C can be removed from inorganic carbon by metamorphic processes, so low values of δ¹³C in metasediments from West Greenland might be organically derived or, equally, they might not.

At the time of writing, geoscientists specialising in Martian matters had become excited by some results from the geochemical system aboard the surviving functional NASA rover. Curiosity has slowly been making its way up Mount Sharp at the centre of Gale Crater near to Mars’s equator. Analysis of high-resolution images taken from orbit suggest that the rocks forming the mountain are sediments. the lowest and oldest strata are suspected to have been deposited in a crater lake when conditions were warmer and wetter on Mars, about 3 billion years ago. Curiosity was equipped with a drill to penetrate and sample sediment unaffected by ultraviolet radiation that long ago would have destroyed any hydrocarbons exposed at the surface. In late 2016, before the rover had reached the lake sediments, the drill’s controller broke down. Since then, Curiosity had moved on to younger, less promising sediments. More than a year later mission engineers fixed the problem and the rover backtracked to try again. Heating the resulting samples to almost 900°C yields any volatile components as a gas to a mass spectrometer, results from which give clues to the molecules released.

‘Selfie’ of Curiosity rover en route to Mount Sharp. (Credit: NASA)

The Sample Analysis at Mars (SAM) team report a range of thiophenic, aromatic and aliphatic molecules of compounds of carbon, hydrogen and sulfur (Eigenbrode, J.L and 21 others 2018. Organic matter preserved in 3-billion-year-old mudtsones at Gale crater, Mars. Science, v. 360, p. 1096-1101; doi:10.1126/science.aas9185). The blend of pyrolysis products closely resembles those which form from heated terrestrial kerogens and coals, but also from pyrolysis of carbonaceous chondrite meteorites. So, the presence of Martian kerogen is not proven. But the results are so promisingly rich in hydrocarbons that another weapon in SAM’s armoury will be deployed, dissolving organic compounds directly from the drill cuttings. This may provide more convincing evidence of collagen. Yet only when samples are returned to labs on Earth will there be a chance to say one way or the other that there was once life on Mars. The results reported in Science’s 8 June issue will surely add weight to the clamour for the Mars 2020 sample-return mission to be funded. Whether or not there is life on Mars demands a great deal more investment still…

A fully revised edition of Steve Drury’s book Stepping Stones: The Making of Our Home World can now be downloaded as a free eBook

The great Cambrian unconformity

Published on June 13, 2018 by zooks7771 Comment

My first field trip from the Geology Department at the University of Birmingham in autumn 1964 was located within hooter distance of the giant British Leyland car plant at Longbridge. It involved a rubbish-filled linear quarry behind a row of shops on the main road through south Birmingham. Not very prepossessing but it clearly exposed a white quartzite, which we were told was a beach deposit laid down by a massive marine transgression at the start of the Cambrian. An hour later we were shown an equally grim exposure of weathered volcanic rocks in the Lickey Hills; they were a sort of purple brown, and said to be Precambrian in age. Not an excellent beginning to a career, but from time to time other Cambrian quartzites sitting unconformably on Precambrian rocks entered our field curriculum: in the West Midlands, Welsh Borders and much further afield in NW Scotland, as it transpired on what had been two separate continental masses of Avalonia and Laurentia. This had possibly been a global marine transgression.

In North America, then the Laurentian continent, what John Wesley Powell dubbed the Great Unconformity in the Grand Canyon has as its counterpart to the Lickey Quartzite the thrillingly named Tonto Group of the Lower Cambrian resting on the Vishnu Schists that are more than a billion years older. Part of the Sauk Sequence, the Tonto Group is, sadly, not accompanied by the Lone Ranger Group, but the Cambrian marine transgression crops out across the continent. In fact it was a phenomenon common to all the modern continents. Global sea level rose relative to the freeboard of the continents then existing. A recent study has established the timing for the Great Unconformity in the Grand Canyon by dating detrital zircons above and below the unconformity (Karlstrom, K, et al. 2018. Cambrian Sauk transgression in the Grand Canyon region redefined by detrital zircons. Nature Geoscience, v. 11, p. 438-443; doi:10.1038/s41561-018-0131-7). Rather than starting at the outset of the Cambria at 542 Ma, the marine transgression was a protracted affair that began around 527 Ma with flooding reaching a maximum at the end of the Cambrian.

Extensive flooding of the continents at the end of the Cambrian (credit: Ron Blakey , Colorado Plateau Geosystems)

It seems most likely that the associated global rise in sea level relative to the continents was a response to the break-up of the Rodinia supercontinent by considerable sea-floor spreading. The young ocean floor, having yet to cool to an equilibrium temperature, would have had reduced density so that the average depth of the ocean basins decreased, thereby flooding the continents. The creation of vast shallow seas across the continents has been suggested to have been a major factor in the explosive evolution of Cambrian shelly faunas, partly by expanding the range of ecological niches and partly due to increased release of calcium ions to to seawater as a result of chemical weathering.

A fully revised edition of Steve Drury’s book Stepping Stones: The Making of Our Home World can now be downloaded as a free eBook

Humans and mass extinction

Published on June 8, 2018 by zooks7771 Comment

It is often said that the biosphere is currently undergoing species losses that may rival those of the ‘Big Five’ mass extinction, with the rate of new extinctions being estimated at about 100 times the background rate during geological time. Scientifically, this is probably a dodgy assumption for palaeobiologists simply do not have the evidence to suggest what such a ‘normal’ rate might be. The fossil record is notoriously incomplete for a whole variety of reasons largely to do with both preservation and fossil collection strategies. For instance, as today, some genera may have been very common and widespread in past times, whereas others rare and restricted to small ecological niches. The record of life is prone to huge errors so that only huge, global shifts in diversity, such as mass extinctions, can be viewed with statistical rigour; and then only with caveats. For sure, the rapid demise of species today is cause for alarm and dismay, and more taxa – mainly of smaller and more restricted groups – probably have escaped identification, and will continue to do so. In the context of growing human impacts on ecosystems across the globe extinction is an increasingly emotive topic, as witness the clamour among some geoscientists for adding a new Anthropocene Epoch to the to the Stratigraphic Column. Does that require renaming the Holocene, beginning 11,700 years ago at the end of the last Ice Age, during which agriculture began? Should its start be assigned to some event during recorded history, such as the European invasion of the Americas after 1493, the beginning of the Industrial Revolution or the explosion of the first thermonuclear weapons in the 1940s and 50s? Or did humans begin significantly to affect the biosphere once their spread from Africa started after about 130 ka ago, i.e. in the late Pleistocene? That argument may well run and run: it is foremost a scientific issue, to which rules apply. A cogent example is that of the fate of megafaunas on the major continents except Antarctica as humans migrated far and wide.

The demise of the large flightless birds of Madagascar and New Zealand form a well known case as they almost certainly followed first colonisation by humans around 200 BC and 1300 CE respectively. The megafaunas of the much larger continents of Australia and the Americas have been deemed to have been more than decimated in the same way after about 65 ka and 15 ka respectively. There are no longer giant armadillos and ground sloths in South America, mammoths ceased to roam North America, and giant wombats, marsupial predators and kangaroos only remain as bones, to name but a few. It has been argued that their extinctions stemmed from the first human migrants literally eating their way through vast terrains. Yet the vast herds of Africa seem not to have been affected in the same way, until much more recently as population grew and modern projectile weapons became widely available. That has been suggested to have resulted from co-evolution of humans and megafauna over two million years, together with instinctive caution among large African beasts, whereas the ‘naivety’ of their counterparts in the Americas and Australia doomed them to extinction. Of course, it is likely that things were a great deal more complicated in every case, as argued in a review of Late Pleistocene megafaunal extinctions by Gilbert Price of the University of Queensland, and colleagues from Australia, the US and Denmark (Price, G.J. et al. 2018. Big data little help in megafauna mysteries. Nature, v. 558, p. 23-25; doi:10.1038/d41586-018-05330-7).

The gist of Price and colleagues’ critique of meta-analyses of data – 32 since 1997 – concerning allegedly human-induced extinctions is that much of the pertinent data is either low quality or poorly understood. For starters, much of the dating is questionable, either using inaccurate and outdated methods or based on inference. For instance, fossils of some alleged victim, e.g. Australian land crocodiles (Quinkana) and giant wombats (Ramsayia), have never been dated. Moreover, dates of the last known fossils are used when they may have remained extant until more recently: wooly Eurasian mammoths were long supposed not to have survived the last glacial maximum, yet recently mammoth bones from Wrangel island were found to be as young as the second millennium BCE. In 2010 spores of the fungus Sporormiella, in sediment cores, which grows only on digested plant matter in herbivore dung, was used as a proxy for the former presence or absence of large herbivore herds. Its decline in sediments after 13 ka in North America happened to coincide roughly with the start of the North American Clovis hunter culture, which was used to show that extinctions of large herbivores were linked to human predation. Yet such fungi also live on excrement of many animals both large and small, and its preservation is affected by changes in climate and water flow. To properly link declines and extinctions in human prey animals requires concrete evidence of predation, such as cut marks on identifiable bones within middens associated with human habitation, such as hearths.

When emotion, ambition and bandwagon tendencies become associated with science, objectivity sometimes gets compromised.

A fully revised edition of Steve Drury’s book Stepping Stones: The Making of Our Home World can now be downloaded as a free eBook

Mystery of upside-down dinosaurs resolved

Published on May 2, 2018 by zooks7771 Comment

Remains of ankylosaurs, a popular family of heavily armoured dinosaurs, occur in sedimentary sequences that range in age from early Jurassic to the close of the Cretaceous. Their defences seem almost impregnable, being constructed of thick, fused scales, often bearing formidable spines, which covered them completely. They bore a crude resemblance to modern armadillos apart from the fact that they were unable to roll-up defensively. In some species the rigid tail bears a large, knob of scale tissue. At up to 3 m long, were the tail to be swung it would have packed bone-cracking momentum. Interestingly, to a poorly sighted predator the club may have been mistaken for the animal’s head at the end of a long neck, so perhaps it lured a potential assailant within range of its devastating power. The largest ankylosaur, from the Cretaceous of western Canada, was the size of a small bus, up to 8m long, 1.5 m wide, standing 1.7 m high and weighing in at around 5 to 8 t. Such dimensions would have made it almost impossible to be bitten, even by the largest predatory dinosaurs, and difficult to turn over. Their teeth show that ankylosaurs were herbivorous, and their somewhat bulbous bodies almost certainly contained a massive digestion system.

The mystery lies in the fact that most ankylosaur fossils are found lying on their backs. Early dinosaur aficionados suggested a tendency for the lumbering beasts to tumble down slopes and become stranded on their backs, so to die miserably. Such clumsiness is hardly a positive characteristic of evolutionary fitness for such a long-lived group, and, besides, the sedimentary formations in which they are found indicate very gentle slopes. So, were they flipped by dextrous predators, as imagined in some early films purporting to look to the distant past? Probably not, for most well preserved fossils show no sign of bites or gnawing. From a study of 36 late-Cretaceous ankylosaurs from Alberta four Canadian and US palaeontologists (Mallon, J.C. et al. 2018. A “bloat-and-float” taphonomic model best explains the upside-down preservation of ankylosaurs. Palaeogeography, Palaeoclimatology, Palaeoecology, v. 497, p. 117-127; doi:10.1016/j.palaeo.2018.02.010 support the idea of their carcases or even living animals having been picked up by flood waters when their high centre of gravity would have flipped them upside down. Bloating through decay might then allow them to be transported large distances. Unsurprisingly, their conclusions rest on model simulations.

When dinosaurs roamed the Western Isles

Published on April 3, 2018 by zooks7778 Comments

The Isle of Skye off the northwest coast of Scotland is known largely as a prime tourist destination, such as Dunvegan Castle with a real clan chief (The MacLeod of MacLeod) and its Faerie Flag; Britain’s only truly challenging mountains of the Black Cuillin; and, of course, the romantic connection with the Young Pretender, Charles Edward Stuart and his escape, in drag, from the clutches of the Duke ‘Butcher’ Cumberland, hence the Skye Boat Song. Geologists know it best for its flood basalts with classic stepped topography and the exhumed guts of a massive central volcano (the Cuillin), relics of the Palaeocene-Eocene (62 to 54 Ma) North Atlantic Large Igneous Province. The spectacular Loch Coruisk, a glacial corrie drowned by the sea, exposes the deepest part of the main magma chamber. It is also the lair of Scotland’s lesser known Monster, the dread Each Uisge (Water Horse). Yet evidence is emerging for the former presence in the Hebrides of other, more tangible monsters.

Skye’s great volcanic edifice rests on Mesozoic sedimentary rocks including shallow-water muddy limestones of the Great Estuarine Group of Middle Jurassic (Bathonian, 174–164 Ma) age. For dinosaur specialists this is of the time when meat-eating theropods and herbivorous sauropods began growing to colossal sizes. Yet the Bathonian is notable for its global paucity in well exposed terrestrial and near-shore sedimentary sequences. Easily accessible, the Skye Bathonian sequence is much visited and has yielded a rich, though generally fragmentary fauna. A group of recent visiting palaeontologists from the University of Edinburgh, the Chinese Academy of Sciences and Skye’s Staffin Museum have discovered an extensive tract of wave-cut platform on the east shore of the Trotternish Peninsula where lagoonal carbonate muds were trampled by several dinosaurs that left around 50 tracks (dePolo, P.E. et al. 2018. A sauropod-dominated tracksite from Rubha nam Brathairean (Brothers’ Point), Isle of Skye, Scotland. Scottish Journal of Geology, online; doi:10.1144/sjg2017-016).

Dinosaur foot prints from Skye. Left example of a sauropod rear-foot print; right theropod. (credit dePolo, P.E. et al. 2018, modified from Figs 8 and 9a)

Some are of medium-sized sauropods (either Parabrontopodus or Breviparopus – both names for footprints rather than any genus of dinosaur) whose crudely elephant-like footprints are up to 0.5 m across (the largest, from Western Australia, are about 1.7 m across). Although there are fragmentary dinosaur bones from the same strata, assigning the footprint to a known species is not possible. However, foot size can be used to estimate how high the creatures’ hips stood (2 to 2.5 m): hefty beasts but not the true giants of later times A variety of three-toed, clawed, somewhat bird-like, footprints also occur. They are assigned to probably bipedal carnivores or theropods. Variation in foot size suggests a range of hip-height from about 0.9 to 2 metres, so these carnivores would have been pretty formidable.

A fully revised edition of Steve Drury’s book Stepping Stones: The Making of Our Home World can now be downloaded as a free eBook

Hadean potentially fertile for life

Published on February 20, 2018 by zooks777Leave a comment

The earliest incontrovertible signs of life on Earth are in the 3.48 billion-year-old Dresser Formation in the Pilbara craton of Western Australia, which take the form of carbon-coated, bubble-like structures in fine-grained silica sediments ascribed to a terrestrial hot-spring environment. In the same Formation are stromatolites that are knobbly, finely banded structures made of carbonates. By analogy with similar structures being produced today by bacterial mats in a variety of chemically stressed environments that are inhospitable for multicelled organisms that might know them away, stromatolites are taken to signify thriving, carbonate secreting bacteria. There are also streaks of carbon associated with wave ripples that may have been other types of biofilm. A less certain record of the presence of life are stromatolite-like features in metasediments from the Isua supracrustal belt of West Greenland, dated at around 3.8 Ga, which also contain graphite with carbon-isotopic signs that it formed from biogenic carbon. Purely geochemical evidence that carbonaceous compounds may have formed in living systems are ambiguous since quite complex hydrocarbons can be synthesised abiogenically by Fischer-Tropsch reactions between carbon monoxide and hydrogen.

At present there is little chance of extending life’s record further back in time than four billion years because the Hadean is mainly represented by pre 4 Ga ages of zircon grains found in much younger sedimentary rocks – resistant relics of Hadean crustal erosion. The eastern shore of Hudson Bay does preserve a tiny (20 km²) patch of metamorphosed basaltic igneous rocks, known as the Nuvvuagittuq Greenstone Belt. Dated at 3.77 Ga by one method but 4.28 Ga by another, this could be Hadean. Like the Isua sequence that in Quebec also contains metasediments, including banded ironstones with associated iron-rich hydrothermal deposits. Silica from the vent system shows dramatically lifelike tubules. Yet the ambiguity in dating upsets any claims to genuine Hadean life. There has also been a physical stumbling block to the notion that life may have originated and thrived during the Hadean: the bombardment record.

English: An outcrop of metamorphosed volcanose... — Metamorphosed volcanosedimentary rocks from the Nuvvuagittuq supracrustal belt, Canada. Some of these rocks contain quite convincing examples of fossil cells. (credit: Wikipedia)

While oxygen-isotope data from 4.4 Ga zircons hints strongly at subsurface and perhaps surface water on Earth at that time, continued accretion of large planetesimals would have created the hellish conditions associated with the name of the first Eon in Earth’s history. Liquid water is essential for life to have formed, on top of a supply of the essential biological elements C, H, O, N, P and S. The sheer amount of interstellar dust that accompanied the Hadean impact record would have ensured fertile chemical conditions, but would the surface and near-surface of the early Earth have remained continually wet? Judging by the lunar surface and that of other bodies in the solar system, after the cataclysmic events that formed the Moon, many Hadean impacts on Earth were in the range of 100 to 1000 km across, with a Late Heavy Bombardment (LHB)that not only increased the intensity of projectile delivery but witnessed the most energetic single events such as those that created the lunar maria and probably far larger structures on Earth. The thermal energy, accompanied, by incandescent silicate vapour ejected from craters, may have evaporated oceans and even subsurface water with calamitous consequences for early life or prebiotic chemistry. Until 2017 no researchers had been able to model the energetic of the Hadean convincingly.

After assessing the projectile flux up to and through the LHB, and the consequent impact heating Bob Grimm and Simone Marchi of the Southwest Research Institute in Boulder, Colorado modelled the likely thermal evolution of the outer Earth through the Hadean. This allowed them to calculate the likely thermal gradients in the near-surface, the volumes of rock each event would have affected and the times taken for cooling after impacts (Grimm, R.E. & Marchi, S. 2018. Direct thermal effects of the Hadean bombardment did not limit early subsurface habitability. Earth and Planetary Science Letters, v. 485, p. 1-9; doi:10.1016/j.epsl.2017.12.043). They found that subsurface ‘habitability’ would have grown continuously throughout the Hadean, even during the worst events of the LHB. Sterilizing Earth and thus destroying and interrupting any life processes could only have been achieved by ten times more projectiles arriving ten times more frequently over the 600 Ma history of the Hadean and LHB. Although surface water may have been evaporated by impact-flash heating and vaporized silicate ejecta, the subsurface would have been wet at least somewhere on the early Earth. Provided it either originated in or colonised surface sedimentary cover it would have been feasible for life to have survived the Hadean. However, nobody knows how long it would have taken for the necessary accumulation of prebiotic chemicals and to achieve the complex sequence of processes that lead to nucleic acids encapsulated in cells and thus self-replication and life itself.

The rise of the eukaryotes

Published on December 14, 2017 by zooks777Leave a comment

You and I, and all the living things that we can easily see belong to the most recently evolved of the three great domains of life, the Eukarya. The vast bulk of organisms that we can’t see unaided are prokaryotes, divided into the Bacteria and the Archaea. Their genetic material floats around in their cell’s fluid, while ours resides mainly in the eukaryote cell’s nucleus with a bit in various organelles known as mitochondria and the chloroplasts of plant cells. Unlike the chicken and egg question, that concerning which came first, prokaryotes or eukaryotes, is answered by DNA. Eukaryote DNA contains a lot from prokaryotes, but the converse does not hold. That contrast posed the question of how eukaryotes arose from the two earlier, simpler forms of life, the answer to which Lynn Margulis suggested to be a whole series of symbiotic relationships among various prokaryotes that shared a host cell; her hypothesis of endosymbiosis. Now, the vast majority of eukaryotes depend on free oxygen for their metabolism, so when the first of them arose boils down to the period of geological history following the Great Oxidation Event around 2.4 billion years ago.

Molecular-clock estimates based on the range of variation in the genomes of a wide range of eukaryotes suggest it took place sometime between 1000 and 2000 Ma. A better means of homing in on a date for the Last Eukaryote Common Ancestor (LECA – as opposed to that of the first organism LUCA) would be that of the earliest fossil to show eukaryote affinities. Grypania from 1.85 Ga, a sort of whorl-like fossil, is a good candidate and is widely thought to be the earliest of our kind but lacks signs of actual cells. More convincing fossils – known generically as acritarchs – from times between 1.5 and 1.0 Ga look like primitive fungi, red algae and slime moulds. A comprehensive review of the microfossils of the Palaeoproterozoic (2.5 to 1.6 Ga) includes both prokaryotes and probable early eukaryotes (Javaux, E.J. & Lepot, K. 2017. The Paleoproterozoic fossil record: Implications for the evolution of the biosphere during Earth’s middle-age. Earth Science Reviews, v. 176, p. 68-86; doi: 10.1016/j.earscirev.2017.10.0001). Yet, despite rapidly accumulating evidence, especially from rocks in China, the picture remains one of monotony; for instance Grypania spans the best part of half a billion years. Bacteria and Archaea cannot be distinguished easily in the absence of preserved DNA. Despite evidence for oxygen in the oceans and atmosphere, apart from a few shallow-water oxygenated examples the chemistry of Palaeoproterozoic marine sediments is dominated by mineralogical outcomes of reducing chemistry. Many chemical isotopic environmental proxies ‘flat-line’ to the extent that the early Proterozoic is sometimes referred to as the ‘boring billion’, yet our ultimate precursors were part of the marine ecosystem. That is, unless one accepts the possibility that that fossils labelled ‘eukaryote’ are colonial prokaryotes – evidence for cell nuclei is sparse. Endosymbiosis, although an attractive model for eukaryote origins, is not proven. The reason for lingering scepticism is that there are only a tiny number of modern examples of prokaryote cells ending up inside those of other prokaryotes.

Whatever, chemical biomarkers in sediments older than about 720 Ma indicate that prokaryotes were the only notable primary producers in the oceans until the Neoproterozoic. Microscopic fossils that are inescapably eukaryotes in the form of amoeba suddenly emerge around that time. This development from the lingering marginality of early eukaryotes to thriving ecosystems that they dominated thereafter is a puzzle seeking a plausible explanation. It coincides with the onset of the Snowball Earth glaciations of the Cryogenian Period (850 to 635 Ma) and a rise in atmospheric and presumably oceanic oxygen. Then macroscopic eukaryotes ‘bloomed’ into distinctively different forms in the Ediacaran Period (635 to 541 Ma) and thereafter. Before the Cryogenian we can perhaps regard eukaryan life and the endosymbiosis that may have given rise to it as a series of ecological experiments repeatedly knocked-back by chemical conditions and competition with the vastly more abundant prokaryotes.

Share this:

Like this:

Share this:

Like this:

Share this:

Like this:

Share this:

Like this:

Share this:

Like this:

Share this:

Like this:

Share this:

Like this:

Share this:

Like this:

Share this:

Like this:

Share this:

Like this: