The ‘boring billion’ years of the Mesoproterozoic: plate tectonics and the eukaryotes

The emergence of the eukaryotes – of which we are a late-entry member – has been debated for quite a while. In 2023 Earth-logs reportedthat a study of ‘biomarker’ organic chemicals in Proterozoic sediments suggests that eukaryotes cannot be traced back further than about 900 Ma ago using such an approach. At about the same time another biomarker study showed signs of a eukaryote presence at around 1050 Ma. Both outcomes seriously contradicted a ‘molecular-clock’ approach based on the DNA of modern members of the Eukarya and estimates of the rate of genetic mutation. That method sought to deduce the time in the past when the last eukaryotic common ancestor (LECA) appeared. It pointed to about 2 Ga ago, i.e. a few hundred million years after the Great Oxygenation Event got underway. Since eukaryote metabolism depends on oxygen, the molecular-clock result seems reasonable. The biomarker evidence does not. But were the Palaeo- and Mesoproterozoic Eras truly ‘boring’? A recent paper by Dietmar Müller and colleagues from the Universities of Sydney and Adelaide, Australia definitely shows that geologically they were far from that (Müller, R.D. et al. 2025. Mid-Proterozoic expansion of passive margins and reduction in volcanic outgassing supported marine oxygenation and eukaryogenesis. Earth and Planetary Science Letters, v. 672; DOI: 10.1016/j.epsl.2025.119683).

Carbon influx (million tons per year) into tectonic plates and into the ocean-atmosphere system from 1800 Ma to present. The colour bands represent: total carbon influx into the atmosphere (mauve); sequestered in tectonic plates (green); net atmospheric influx i.e. total minus carbon sequestered into plates (orange). The widths of the bands show the uncertainties of the calculated masses shown as darker coloured lines.

From 1800 to 800 Ma two supercontinents– Nuna-Columbia and Rodinia – aggregated nearly all existing continental masses, and then broke apart. Continents had collided and then split asunder to drift. So plate tectonics was very active and encompassed the entire planet, as Müller et al’s palaeogeographic animation reveals dramatically. Tectonics behaved in much the same fashion through the succeeding Neoproterozoic and Phanerozoic to build-up then fragment the more familiar supercontinent of Pangaea. Such dynamic events emit magma to form new oceanic lithosphere at oceanic rift systems and arc volcanoes above subduction zones, interspersed with plume-related large igneous provinces and they wax and wane. Inevitably, such partial melting delivered carbon dioxide to the atmosphere. Reaction on land and in the rubbly flanks of spreading ridges between new lithosphere and dissolved CO2 drew down and sequestered some of that gas in the form of solid carbonate minerals. Continental collisions raised the land surface and the pace of weathering, which also acted as a carbon sink. But they also involved metamorphism that released carbon dioxide from limestones involved in the crustal transformation. This protracted and changing tectonic evolution is completely bound up through the rock cycle with geochemical change in the carbon cycle.

From the latest knowledge of the tectonic and other factors behind the accretion and break-up of Nuna and Rodinia, Müller et al. were able to model the changes in the carbon cycle during the ‘boring billion’ and their effects on climate and the chemistry of the oceans. For instance, about 1.46 Ga ago, the total length of continental margins doubled while Nuna broke apart. That would have hugely increased the area of shallow shelf seas where living processes would have been concentrated, including the photosynthetic emission of oxygen. In an evolutionary sense this increased, diversified and separated the ecological niches in which evolution could prosper. It also increased the sequestration of greenhouse gas through reactions on the flanks of a multiplicity of oceanic rift systems, thereby cooling the planet. Translating this into a geochemical model of the changing carbon cycle (see figure) suggests that the rate of carbon addition to the atmosphere (outgassing) halved during the Mesoproterozoic. The carbon cycle and probable global cooling bound up with Nuna’s breakup ended with the start of Rodinia’s aggregation about 1000 Ma ago and the time that biomarkers first indicate the presence of eukaryotes.

Simplified structures of (a) a prokaryote cell; (b) a simple eukaryote animal cell. Plants also contain organelles called chloroplasts

So, did tectonics play a major role in the rise of the Eukarya? Well, of course it did, as much as it was subsequently the changing background to the appearance of the Ediacaran animals and the evolutionary carnival of the Phanerozoic. But did it affect the billion-year delay of ‘eukaryogenesis’ during prolonged availability of the oxygen that such a biological revolution demanded? Possibly not. Lyn Margulis’s hypothesis of the origin of the basic eukaryote cell by a process of ‘endosymbiosis’ is still the best candidate 50 years on. She suggested that such cells were built from various forms of bacteria and archaea successively being engulfed within a cell wall to function together through symbiosis. Compared with prokaryote cells those of the eukaryotes are enormously complex. At each stage the symbionts had to be or become compatible to survive. It is highly unlikely that all components entered the relationship together. Each possible kind of cell assembly was also subject to evolutionary pressures. This clearly was a slow evolutionary process, probably only surviving from stage to stage because of the global presence of a little oxygen. But the eukaryote cell may also have been forced to restart again and again until a stable form emerged.

See also: New Clues Show Earth’s “Boring Billion” Sparked the Rise of Life. SciTechDaily, 3  November 2025

End-Ordovician mass extinction, faunal diversification, glaciation and true polar wander

Enormous events occurred between 460 and 435 Ma around the mid-point of the Palaeozoic Era and spanning the Ordovician-Silurian (O-S) boundary. At around 443 Ma the second-most severe mass extinction in Earth’s history occurred, which eliminated 50 to 60% of all marine genera and almost 85% of species: not much less than the Great Dying at the end of the Permian Period. The event was accompanied by one of the greatest biological diversifications known to palaeontology, which largely replaced the global biota initiated by the Cambrian Explosion. Centred on the Saharan region of northern Africa, Late Ordovician glacial deposits also occur in western South America and North America. At that time all the current southern continents and India were assembled in the Gondwana supercontinent, with continental masses that became North America, the Baltic region, Siberia and South China not far off: all the components that eventually collided to form Pangaea from the Late Silurian to the Carboniferous.

The mass extinction has troubled geologists for quite a while. There are few signs of major volcanism having been involved, although some geochemists have suggested that very high mercury concentrations in some Late Ordovician marine sediments bear witness to large, albeit invisible, igneous events. No large impact crater is known from those times, although there is a curious superabundance of extraterrestrial debris, including high helium-3, chromium and iridium concentrations, preserved in earlier Ordovician sedimentary rocks, around the Baltic Sea. Another suggestion, poorly supported by evidence, is destruction of the atmospheric ozone layer by a gamma-ray burst from some distant but stupendous supernova. A better supported idea is that the oceans around the time of the event lacked oxygen. Such anoxia can encourage solution of toxic metals and hydrogen sulfide gas. Unlike other mass extinctions, this one was long-drawn out with several pulses.

The glacial epoch also seems implicated somehow in the mass die-off, being the only one known to coincide with a mass extinction. It included spells of frigidity that exceeded those of the last Pleistocene glacial maximum, with the main ice cap having a volume of from 50 to 250 million cubic kilometres. The greatest of these, around 445 Ma, involved a 5°C fall in global sea-surface temperatures and a large negative spike in δ13C in carbon-rich sediments, both of which lasted for about a million years. The complex events around that time coincided with the highest ever extinction and speciation rates, the number of marine species being halved in a short space of time: a possible explanation for the δ13 C anomaly. Yet estimates of atmospheric CO2 concentration in the Late Ordovician suggests it was perhaps 8–16 times higher than today; Earth should have been a warm planet then. One probable contributor to extreme glacial conditions has been suggested to be that the South Pole at that time was well within Gondwana and thus isolated from the warming effect of the ocean. So, severe glaciation and a paradoxical combination of mass extinction with considerable biological diversification present quite an enigma.

A group of scientists based in Beijing, China set out to check the palaeogeographic position of South China between 460 and 435 Ma and evaluate those in  O-S sediments at locations on 6 present continents (Jing, X., Yang, Z., Mitchell, R.N. et al. 2022. Ordovician–Silurian true polar wander as a mechanism for severe glaciation and mass extinction. Nature Communications, v. 13, article 7941; DOI: 10.1038/s41467-022-35609-3). Their key tool is determining the position of the magnetic poles present at various times in the past from core samples drilled at different levels in these sedimentary sequences. The team aimed to test a hypothesis that in O-S times not only the entire lithosphere but the entire mantle moved relative to the Earth’s axis of rotation, the ‘slippage’ probably being at the Core-mantle boundary [thanks to Steve Rozario for pointing this out]. Such a ‘true polar wander’ spanning 20° over a mere  2 Ma has been detected during the Cretaceous, another case of a 90° shift over 15 Ma may have occurred at the time when Snowball Earth conditions first appeared in the Neoproterozoic around the time when the Rodinia supercontinent broke up and a similar event was proposed in 1994 for C-O times albeit based on sparse and roughly dated palaeomagnetic pole positions.

Xianqing Jing and colleagues report a wholesale 50° rotation of the lithosphere between 450 and 440 Ma that would have involved speeds of about 55 cm per year. It involved the Gondwana supercontinent and other continental masses still isolated from it moving synchronously in the same direction, as shown in the figure. From 460 to 450 Ma the geographic South Pole lay at the centre of the present Sahara. At 445 Ma its position had shifted to central Gondwana during the glacial period. By 440 Gondwana had moved further northwards so that the South Pole then lay at Gondwana’s southernmost extremity.

Palaeogeographic reconstructions charting true polar wander and the synchronised movement of all continental masses between 460 and 440 Ma. Note the changes in the trajectories of lines of latitude on the Mollweide projections. The grey band either side of the palaeo-Equator marks intense chemical weathering in the humid tropics. Credit Jing et al. Fig 5.

As well as a possible key to the brief but extreme glacial episode this astonishing journey by a vast area of lithosphere may help account for the mass extinction with rapid speciation and diversification associated with the O-S boundary. While the South Pole was traversing Gondwana as the supercontinent shifted the ‘satellite’ continental masses remained in or close to the humid tropics, exposed to silicate weathering and erosion. That is a means for extracting CO2 from the atmosphere and launching global cooling, eventually to result in glaciation over a huge tract of Gondwana around 445 Ma. Gondwana then moved rapidly into more clement climatic zones and was deglaciated a few million years later. The rapid movement of the most faunally diverse continental-shelf seas through different climate zones would have condemned earlier species to extinction simultaneous adaptation to changed conditions could have encouraged the appearance of new species and ecosystems. This does not require the catastrophic mechanisms largely established for the other mass extinction events. It seems that during the stupendous, en masse slippage of the Earth’s lithosphere plate tectonic processes still continued, yet it must have had a dynamic effect throughout the underlying mantle.

Yet the fascinating story does have a weak point. What if the position of the magnetic poles shifted during O-S times from their assumed rough coincidence with the geographic poles? In other words, did the self-exciting dynamo in the liquid outer core undergo a large and lengthy wobble? How the outer core’s circulation behaves depends on its depth to the solid core, yet the inner core seems only to have begun solidifying just before the onset of the Cambrian, about 100 Ma before the O-S events. It grew rapidly during the Palaeozoic, so the thickness of the outer core was continuously increasing. Fluid dynamic suggests that the form of its circulation may also have undergone changes, thereby affecting the shape and position of the geomagnetic field: perhaps even shifting its poles away from the geographic poles …