The gold bugs defence

Australia is rightly famous for its gold nuggets and some, such as the ‘Golden Eagle’ found at Coolgardie, were as big as a gap-year’s rucksack. The curious thing about them is that they are generally found in the most featureless parts of the continent, Western Australia being a case in point. What sharpens the paradox is that these flat areas have been peneplains for up to a billion years. A nugget found in a Yukon or Californian stream is easily attributed to high-energy transport in water, and indeed most of those show signs of long transport in water: they are rounded and pitted. The one kilogram and weightier nuggets from Australia could never have been physically moved across the featureless plains, and most of them come from the alluvium deposited by sluggish Cenozoic drainages, now as dry as a bone — the ‘deep leads’ famous for their gold rushes in the past. They are also oddly shaped, the ‘Golden Eagle’ having wing-like flanges, which any physical transport would bend into conformity, for gold is of course very malleable. One long-held hypothesis is that they formed by precipitation from the extremely noxious groundwater that still persists tens of metres beneath the surface, gold being water-transportable in the form of complex ions such as those involving Au and Cl­. But it now seems that the mediator is bacterial in origin (Reith, F. et al. 2006. Biomineralization of gold: biofilms on bacterioform gold. Science, v. 313, p. 233-236).

Frank Reith and his Australian colleagues collected soils that contain small gold grains from goldfields across the continent. A great many have strangely knobbly surfaces and branching structure when scanned under an electron microscope, whereas fine gold grains from primary deposits in hard rock often shows signs of gold’s crystal symmetry, or at least highly angular surfaces. The soil-gold particles do look as though they formed in association with living processes. Using stains that fluoresce when bonded to organic matter the researchers found numerous associations between gold and organisms of some kind. When organic material was leached from separated gold grains it revealed DNA closely similar to a bacterium that is known experimentally to precipitate gold from dissolved Au-Cl  complexes. Ordinary soil grains showed no such genetic tracers. It looks as if Reith et al. have discovered living biofilms coating the gold grains that the constituent bacteria are in the process of growing. Amazingly, they also found gold-plated living bacterial cells. The probable explanation is that the bacteria live in water so rich in gold (by no means a great deal of it, however) that they are defending themselves from gold’s known toxicity — Ralstonia metallidurans, as its Latin name suggests, is a highly metal-tolerant organism. Nuggets may well form as a result of bacterial defence mechanisms.

‘Peace’ (Selam) disturbed

The Afar Depression of Ethiopia, especially the middle reaches of the Awash River, has become world renowned as the cradle for early humanity. After the revolutionising discovery in 1974 in the Hadar area of the 3.3 Ma old Australopithecus afarensis remains that became known as ‘Lucy’, other finds – Ardepithecus, Orrorin and Sahelanthropus hit the headlines, pushing back the age of possible human ancestors to almost 7 Ma. None of these had Lucy’s degree of preservation, and the vital issue for the origin of humanity – bipedalism – could only be addressed by scanty evidence about the position of attachment of the cranium to the spine. Much else had to be inferred from teeth and facial shape, and odd bits of long limb bones. Lucy and remains of other A. afarensis individuals that rain progressively washes from the badlands of Hadar provide an embarrassment of riches by comparison. There is little doubt that could walk upright, but a question that has lingered is whether or not it also clambered habitually in trees. The other missing information is the vital one of development, for one big difference between apes and us is the grossly extended infancy of modern humans during which the attributes of consciousness, language and much else that is unique arise. To get a grip on developmental issues demands near-complete juvenile remains. The oldest infant fossils that come close are those of a Neanderthal child from 100 ka ago. A dramatic paper (Alemseged, Z. et al. 2006. A juvenile early hominin skeleton from Dikika, Ethiopia. Nature, v. 443, p. 296-301) brings the spotlight back to Middle Awash and to A. afarensis.

The drama has been long in the making. Zeresenay Alemseged, an Ethiopian working in Germany, made the initial find in 2000, collecting more material and painstakingly exposing bones from their sandstone matrix, grain by grain, over the last 5 years. The skull and dentition are complete, and bar the pelvis, lower spine and some limb bones, so is the rest of the skeleton. Morphology points unerringly to A. afarensis, and the stratigraphic position is the same as that entombing ‘Lucy’. Even without the inferences that can be drawn from it, preservation of a complete body is a near-miracle that ranks with that of the ‘Turkana Boy’ (H. ergaster) and ‘Lucy’. The entombing sediments are those of a small stream, which discharged to a large lake that occupied parts of the Middle Awash area during the Pliocene, so that the body was quickly enclosed in fine sands, possibly after the child was washed away in a flash flood. The jaws contain adult teeth waiting to erupt and, by comparison with chimpanzees, they suggest an age at death of about three years, although comparison with human children would probably give an older estimate. The shape of the adult teeth is similar to those of female, so the infant is a ‘she’. Much more work needs to be done on ‘Selam’ (Peace in Amharic), but that reported so far bears strongly on the issue of bipedalism. The shoulder blades and semi-circular canals of the ear, on which balance depends, are ape-like, and a finger bone is curved like that of a chimpanzee. ‘Selam’ was equipped for climbing, but she has leg and foot bones with more human affinities, which would enable upright walking as well. Being a near-complete individual, ‘Selam’ can be compared with whole adult A. afarensis specimens, notably ‘Lucy’, and with modern apes and humans, to assess the crucial issue of development that should throw light on just how close the species was to a transition to the human species that arose about a million years later.

Interestingly, the same issue of Nature includes a mini-biography of the Tunisian-born geologist Maurice Taib. He was the first to work on the terrestrial Pliocene sediments of the middle reaches of the Awash River, thereby opening to road to palaeoanthropolical fame for the likes of Don Johanson, Tim White and two generations of Ethiopian scientists, whom Taib played a major role in training and encouraging (Dalton, R. 2006. The history man. Nature, v. 443, p. 268-269).

See also: Wood, B. 2006. A precious little bundle. Nature, v. 443, p. 278-281. Wynn, J.G. et al. 2006. Geological and palaeontological context of a Pliocene juvenile hominin at Dikika, Ethiopia. Nature, v. 443, p. 332-336.

Drying East Africa

The 7 Ma recorded history of humans and their hominin ancestors was almost exclusively East African, until early members of the genus Homo began to migrate in pulses after about 1.8 Ma. Exodus from Africa on several occasions has been linked with climate change or the opening of routes by falls in sea level during periods of massive ice accumulation at high northern latitudes. Likewise, the evolutionary adoption of a bipedal gait by formerly forest-dwelling apes was probably driven by climate change that saw the spread of more open savannah ecosystems. Records from fossil assemblages in river and lake-bed sediments of East Africa, and from pollen in nearby sea-floor sediments do show a reduction in woodland cover and a spread of grasslands since the Upper Miocene (6 to 8 Ma) – the period of hominin adaptive radiation. Most workers on African climate change in the Neogene attribute the shift to cooling, either through a fall in atmospheric CO2 or the onset of Northern Hemisphere glaciation. Yet East Africa has its own engine for climate and ecosystem change: the formation of the great Rift system and the uplift associated with it. While recognised as a climatic influence tectonics in the region has been downplayed by comparison with global shifts. That is surprising, since in the last 20 Ma, and perhaps more recently, what was an area of low relief has been transformed while rift shoulders rose to more than 3 km, from Eritrea in the north to Malawi 6000 km to the south.

Before rifting began, flood volcanism poured out a basaltic veneer in the late Eocene to mid-Oligocene, to achieve a thickness of more than 2 km in Ethiopia. Rather than creating high ground the flood basalts, being denser than continental crust, probably caused subsidence that roughly maintained low surface elevations. The achieved their present high elevations in the Ethiopian Plateau no earlier than the late Miocene. Large plateaux deflect low altitude winds and seem certain to have influenced climate on a regional scale, as did the Tibetan Plateau. The timing and pace of East African uplift remains poorly constrained, partly because geological evidence shows highly episodic tectonics, with periods of seeming quiescence between episodes of extensive and profound faulting and uplift, and partly because many of the rocks involved are sparsely dated. Yet the present topography and geological infrastructure are sufficiently well known that modelling any morphological influence on climate is possible.  By considering several plausible tectonic scenarios, a team of French palaeoclimatologists have modelled the possibilities (Sepulchre, P. et al. 2006. Tectonic uplift and eastern Africa aridification. Science, v. 313, p. 1419-1423). Their models show that uplift may have shifted atmospheric circulation drastically to establish the strong seasonality that dominates the region nowadays. Applying their results to likely ecosystems results in a pattern of decreased tree-cover.

While convincing, Sepulchre and colleagues’ work demands more precise timing for the establishment of sufficient tectonic topography. Nevertheless, it shows that events, arguably beginning at the core-mantle boundary, that triggered East Africa’s dominant tectonic influence, the Afar plume, probably conditioned our own eventual emergence.

A lot closer in time is an analysis of climate change in the Eastern Sahara desert since the end of the Younger Dryas (<12 ka) that devotees of the ‘English Patient’ will find revealing (Kuper, K. & Kröpelin, S. 2006. Climate-controlled Holocene occupation in the Sahara: motor of Africa’s evolution. Science, v. 313, p. 803-807. Being based on 150 archaeological excavations, the account of sudden humidity after 8.5 ka and then slow aridification since 5.3 ka is persuasive background to the rise of the pharaonic kingdoms of the Nile once nomadic Saharan pastoralism slowly became impossible.

Asian migrations reviewed

Sometime between 100 and 60 ka, fully modern humans found their way from Africa to the Far East and beyond. The timing and the issue of how many migrations were involved are topics in turmoil, now that genetic analyses help trace linkages among modern people. That was semi-popularised by Steven Oppenheimer’s The Peopling of the World (2003, Constable, London), which remains the genetically based ‘straw man’ of human migrations. Like Oppenheimer, Paul Mellars also of the Dept of Archaeology at Cambridge University, argues for single exodus and rapid eastward dispersal, but leaves open the route either via the Straits of Bab el Mandab or through Mesopotamia (Mellars, P. 2006. Going East: new genetic and archaeological perspectives on the modern human colonization of Eurasia. Science, v. 313, p. 796-800). While genetic lines of descent are a most powerful tool, any conclusions need confirmation through ‘hard’ evidence from excavations, and both Arabia and the India subcontinent are irritatingly blank in that regard.  However, there are a few coastal sites that whet the appetite.  As Jonathan Kingdon first suggested, in Self-made Man and His Undoing (1993, Simon and Schuster, London), the most likely routes for migrants would have been along the shoreline. ‘Strandlopers’ would have had easy pickings from littoral food sources, even during periods of aridity related to global cold spells. But there is the problem: with sea levels well below the present ones, most truly ancient sites will now be hidden below the sea. As regards the route taken, much depends on what the Nile valley has to offer archaeologically, for that is the natural way to the eastern Mediterranean and access to the Arab Gulf either across Syria or skirting the mountains of Kurdistan. The route across the Red Sea already has excellent support by the discovery by the Gulf of Zula in Eritrea of abundant evidence for habitation by ‘strandlopers’ around 100 ka.

Detecting and mapping ancient soils

During the early Cenozoic, and perhaps before that, huge areas of the exposed continental surface were subject to hot humid climatic conditions. That broke down every conceivable rock type to a few simple minerals that were both stable and insoluble. Such intense weathering possibly affected 30% of the land area during those ‘hothouse’ times. Where the surface was flat, the resulting residual soils were preserved to form laterites, strongly layered mineralogically. Since one of the common components is bright-red hematite, and its brown hydrous equivalent goethite, and another is brilliant white kaolinite, laterites are also stunningly layered in colour from white iron-poor clays at their base through an middle mottled yellow, orange, pink and white zone, to brick-red iron-rich ferricrete at the top of the sequence. No-one can fail to see laterites where they are exposed, but few geologists have set out to understand them. A recent paper provides a clear guide to begin that work on a grand scale, and also to chart where their unique properties and socio-economic pros and cons can be developed or avoided respectively (Andrew Deller, M.E. 2006. Facies discrimination in laterites using Landsat Thematic Mapper, ASTER and ALI data—examples from Eritrea and Arabia. International Journal of Remote Sensing, v. 27, p. 2389–2409).

The key to the long and complex chemical and mineralogical evolution of laterites lies in the different layers or facies in these palaeosols. Because they are thin and once present over vast areas of Africa, South America, India and Australia, their presence or absence today is a guide to the history of erosion and intraplate deformation after they formed. Each facies has very different chemical and physical properties, some advantageous, and some decidedly a threat of some kind, recognised and well documented by M.E. Andrews Deller of the British Open University. For instance, the clay zone is a lubricant that can encourage landslides of great thicknesses of overlying rock, yet is a potential resource — it is China Clay. Hard and porous ferricrete, containing both iron minerals and clays, makes it a cheap source of bricks and even road aggregate. But hematite can pose a frightening risk. Its open structure soaks up dissolved ions, including infamously those of arsenic, which lateritisation can set in motion from the rocks on which it develops. Hematite dissolves under reducing conditions, and should those develop on old laterites arsenic might be liberated to groundwater. Another associated compound that laterites can release is magnesium sulfate (Epsom Salts), an natural emetic but also a potential remedy for eclampsia that threatens mothers and their babies throughout laterite-mantled Africa.

Andrews Deller’s paper is a mine of laterite-related information, yet its central theme is the essential first step of mapping them and discriminating their facies. Her starting point is their mineralogical simplicity, and the unique and distinct spectral properties of those constituent minerals. She matches these to the spectral coverage of freely available remote sensing data — Landsat TM, ASTER and ALI — each of which offers nuances to be exploited in uniquely discriminating the zones. Rather than setting out to ‘unveil’ sophisticated new methods of computer analysis (to which few in laterite-encrusted areas would have access), she chose the simplest useful approaches to a previously overlooked challenge: laterite facies have never been discriminated and mapped before. The results in this well-illustrated paper are stunning, and any geologist, and quite likely many lay people can understand what they show, thanks to careful discussion. The result is a paper that combines interest, novelty and usefulness. The last is the best aspect: geologists can learn from the paper how confidently to make highly informative maps cheaply and quickly.

ASTER data and earthquakes

NASA’s Jet Propulsion Laboratory in Pasadena, California is a huge engine of across-the-board innovation. In my field, remotely sensed geology, everyone pounces eagerly on publications by its scientists because they are bound to push techniques and applications forwards, often in surprising contexts, such as archaeology from space. One such nugget is about to be published (probably this month) in the premier geoscience journal EPSL (Avouac, P. et al. 2006. The 2005, Mw 7.6 Kashmir earthquake: Sub-pixel correlation of ASTER images and seismic waveforms analysis. Earth and Planetary Science Letters, in press doi:10.106/j.epsl.2006.06.025) and amply justifies my impatient preview here. It offers great potential for monitoring the effects of natural hazards that involve mass motion using free (for bona fide researchers and, hopefully, humanitarian organizations) satellite image data.

Jean-Phillipe Avouac and colleagues at JPL applied a well-tried approach in remote sensing — comparison of images captured on different dates—in trying to assess the extent and magnitude of ground motion involved in the 8 October 2005 Kashmir earthquake that claimed at least 80 thousand lives. But theirs is a before-and-after study with a revolutionary new slant. ASTER data from the joint US-Japanese Terra satellite resolves the ground with a resolution as sharp as 15 m, in several wavebands of EM radiation. In their own right, these bands contain huge amounts of information about vegetation, rocks and soils, and many other environmental attributes. Particularly with vegetation, comparing data from different years or seasons soon shows up changes and clues as to why they occurred. But ASTER has another potential view to offer. Two of its sensors, one pointing vertically downwards, the other obliquely back along its ground track, constitute a stereopair. They can be viewed together to give dramatic 3-D visualizations of terrain. With the appropriate software, the parallax difference between the location of each point on the ground in the two images produces a map of terrain elevation. The novelty and potential in Avouac et al. is to combine ASTER data from two instants in time to find places that have shifted in position in the meantime. So that they match geographically, they used stereo-derived terrain elevation to remove geometric distortions caused by viewing rugged relief with effectively a wide-angle camera. The key to extracting deformation parameters is applying shape-detection software to images from before and after an event, and then finding the magnitude and direction of the differences between landform shapes to chart movement. The 15 m resolution poses a limit, but the sophistication of the algorithms enables shifts of the order of less than a metre to be detected at a coarse resolution of 150 m. But that is quite sufficient to show what happened in Kashmir along the entire length of fault movement in 2005. Applied to commercially available stereo data (up to 0.65 m resolution) the results would be awesome.

Confused by radiocarbon ages? Hopefully, not anymore

When we come to the near past, signifying time that has elapsed becomes unclear. Most christians divide the last four thousand years into AD and BC (with some confusion as to whether the division is at 1 or 0 AD), yet muslims place their starting year differently, and so might many other faiths, if they so chose. The adoption of ‘Before the Common Era’ and ‘the Common Era’ (BCE and CE, which are the same as BC and AD) really doesn’t help politically, being based on a now obvious fact: that the dominantly christian US and EU dominate the planet. The only foolproof way to judge elapsed time in years is to have some continual and irrefutably annual events to count. Now, it is not always convenient to use the annual growth rings in a collection of enormous logs of a variety of ages to tell time, and the same goes for snow layers in polar ice caps and layered stalagmites. Using the decay of radioactive 14C in preserved carbon-containing materials revolutionised archaeology and the science of recent climate change. But it has a snag, for 14C, unlike many other geochronometers, is continually being formed, by cosmic ray bombardment of nitrogen in the upper atmosphere. Cosmic ray flux is not constant, so the proportion of 14C to stable carbon was different at any time in the past. Until recently nobody knew how that proportion had varied. Radiocarbon ages have to be calibrated in some way, so that they record events in a truly absolute time-frame. Without calibration, even the most precise age determinations give a warped view of history (see Rationalising radiocarbon dating in the February 2004 issue of EPN). For instance, the date when the Younger Dryas glacial pulse began was a thousand calendar years before its calibrated 14C age. Despite heroic efforts to establish a link between radiocarbon ages and the true passage of years from long annual records in dateable materials, calibration gaps in the ~50 ka period achievable by using the quite short half-life of 14C have caused a problem. Many published and even some new dates are given without calibration, while others are in ‘years before present (BP)’, i.e. before the start of above-ground atomic bomb tests in 1950, which uniformly contaminated all later atmospheric carbon with 14C produced by nuclear transformation. The confusion should soon be resolved as the effort to match productivity of 14C to real time nears completion (Balter, M. 2006. Radiocarbon dating’s final frontier. Science, v. 313, p. 1560-1563). But some workers are impatient to give real ages using calibration curves for difficult periods, which have not yet been verified and are controversial. An interesting case relates to the possible overlap period, roughly around 35 to 30 ka ago, between fully modern humans and Neanderthals in Europe. That awkward era may soon be clarified with the unearthing of monstrous logs from New Zealand swamps, which may contain annual rings back to the 50 ka limit.

Is the idea of Hadean continental crust bunkum?

As these monthly jottings have noted several times, the geological record of the Hadean (before 4 Ga ago) could easily be lost through an ill-timed sneeze: it consists of a few minute zircon grains extracted from common or garden Archaean meta-sandstones in Western Australia. Milligram for milligram, these have become the heaviest punchers in the world of geochemical debate. They undoubtedly crystallized as long ago as 4.4 Ga. More controversially their detailed chemistry has been suggested to indicate that their crystallization was from granitic magma formed by partial melting of materials that interacted with water at around 700°C; materials that were not primarily of mantle composition (see Zircons and early continents no longer to be sneezed at in EPN February 2006 issue). If true, that would suggest low-density crust that found difficulty in being recycled into the mantle only a few tens of Ma after the Earth’s formation. Either that crust was too thin to resist subduction by some kind of tectonic slicing and has gone for ever, or some of it is still out there waiting to be found…by those who become very excited by extremely aged rocks. There is a simple way of putting the early-granite hypothesis to the test — by seeing if zircons in basalts are any different from them (Coogan, L.A. & Hinton, R.W. 2006. Do the trace element compositions of detrital zircons require Hadean continental crust? Geology, v. 34, p. 633-636).

Coogan and Hinton, of the University of Waterloo, Canada and Edinburgh University respectively, show that Hadean zircons cannot be distinguished chemically from those found in gabbros that have differentiated from basaltic magmas at modern mid-ocean ridges. As if that were not sufficiently deflating, they also made crystallization-temperature estimates of the gabbro-derived zircons, using a geothermometer that uses the titanium content of zircon in equilibrium with rutile. Despite the fact that the real temperature of gabbro crystallization is well over 1000°C, these estimates came in at between 700 and 800°C. That is, about the same as those proposed as evidence for the crystallization temperature of Hadean zircons from a granitic magma. Coogan and Hinton were not content, and go on to offer an alternative explanation for the zircon’s oxygen isotopes, used by others as evidence for the influence of water at shallow depths back to 4.4 Ga. The seemingly water-derived 18O excess in the zircons could well have come from carbonates recycled from surface weathering of basalt, to be assimilated by deep basaltic magma chambers.

And now, another blow for ‘Snowball Earth’

The so-called Cryogenian Period of the Neoproterozoic rests on evidence for coincident glaciation at all latitudes. It has been supposed to include at least two, maybe three and perhaps more frigid ‘snowball’ events, each with a pattern of lower diamictites and an upper carbonate cap rock. The most widely supposed glacial epochs are the Sturtian at 712 Ma, the Marinoan at 635 Ma and the Gaskiers at 580 Ma, but Precambrian sedimentary sequences are notoriously difficult to tie down in time. Only if dateable igneous events bracket evidence for glaciation is an age truly valid. Yet the global 3-fold division depends largely on correlation of stratigraphic and carbon-isotope sequences with the odd few that are dated in an absolute time-frame. The developing field of rhenium-osmium (Re-Os) radiometric dating offers a more universal check, since it provides a means of dating highly reduced black shales, that are abundant in the Neoproterozoic. The first reported results come as a blow to the ‘Snowball Earth’ community (Kendall, B. et al. 2006. Re-Os geochronology of postglacial black shales in Australia: constraints on the timing of the ‘Sturtian’ glaciation. Geology, v. 34, p. 729-732).

Bruce Kendall and colleagues from the Universities of Alberta, Canada and the Durham, UK have constrained some of the principal occurrences of the Sturtian event in Australia to between 643 and 657 Ma, by dating the shales which envelop the diamictites and cap carbonates. They are younger than even the widest range previously suggested for the Sturtian: either the glaciation was grossly diachronous, or this is yet another glaciation of ‘Sturtian’type. The best that can be concluded is that the ‘Cryogenian’ was cold but glaciation shifted from place to place – a ‘slushball’ model?

Assigning Copyright

If anything is growing super-exponentially (where the rate of growth also grows) it is the annual number of scientific publications. Since the number of potential readers is not, a crunch point is surely coming where the average number of readers of a learned paper may be just the authors themselves: someone with the time can do the necessary arithmetic to check that casual prognosis. To a semi-professional browser of a few leading journals in one subject area, it does sometimes seem as if that point arrived a while back. Yet the number of actual journals is growing as well, for example Nature now has more than 30 satellite journals, when once it stood at stratospheric height astride the entire breadth of Science. One journal, which professional etiquette will not allow me to mention by name, is currently submerged beneath a backlog of unpublished but accepted papers, to the extent that a decision to jump from 18 issues to 24 per year has run into difficulties. Its next 6 issues will be bundled into two weighty volumes to clear the desks of a single sub-editor, who it seems is definitely getting a bit ‘frayed around the edges’. How do publishers manage to blurt out such an awesome volume without a sort of heat death of the literary universe and, more mundanely, economic collapse? For a start, they take adverts and up the subscription rates, both for paper and on-line versions. Oddly there is a huge range of subscription rates for top-ranking geoscientific journals, from about £100 for the beautifully typeset and edited Journal of Geology published by University of Chicago Press to almost £3000 for Palaeogeography, Palaeoclimatology, Palaeoecology published by Elsevier (2005 rates). Publishers can charge for colour content – most do but a few do not. Of course, they do not pay for a paper’s creative content, unlike almost every other kind of publication, but that is born of hubris, which is probably inbred among scientists. For the same reason they do not pay their referees; in fact I am sure that some would pay for the privilege (see above). Let us be clear on one thing: scientific publishing is a hugely profitable business, and most scientists would be hamstrung if they did not go along with its rapacity, unless perhaps they club together to create free on-line, peer-reviewed journals outside the pack.

Among the ruses aimed at milking the demonically possessed Gadarene herd, to which most scientists belong, is one worth special approbation: compulsory assignment of copyright (Marris, E. 2006. PS I want all the rights. Nature, v.442, p. 118-119). That is relatively new, and along with it is a rapid attrition of the only perk, free offprints to distribute, amaze your friends and rub salt in the wounds of your enemies. It is now common to give authors only the final on-line PDF, file, but with stern warnings that only a certain number of free distributions are allowed. To get paper offprints (still much more highly valued by colleagues than electronic text), authors increasingly have to pay extortionate fees, almost equivalent page per page to the market value of a hand-illuminated, mediaeval manuscript. Let’s get this straight, publishers do not pay authors (and referees), and often demand payment for necessary colour work that visually enhances journals (costs of 4-colour printing have plummeted in recent years), yet claim ownership of the published article, effectively violating the intellectual property rights of authors. A powerful move against this is beginning. Original PDFs of almost 50 % of papers inScience and Nature and increasing numbers of those in other prestigious journals are appearing for free download from the Web. Major grant givers in the medical sciences now demand that work that they sponsor becomes free to all, once published. Some provide authors with forms to add to the copyright transfer papers that must be signed to ensure free access to all. Publishers complain direly that such action will destroy their journals financially, claiming that, ‘the final version is where publishers add value’ and that the version published by a journal is ‘definitive’, ‘part of the minutes of science’. Readers can draw their own conclusions about this issue of form versus content. It is relatively simple to prepare PDFs of corrected papers and their figures to a publishing standard and distribute them freely, a widely adopted move among physicists, biologists and medical scientists through open-access libraries such as PubMedCentral.

 

Anonymous referees

Anyone who submits their first paper to a journal soon becomes aware of the “peer review” process: probably the single greatest contributor to academic suspicion and anxiety.  Of course, these “peers” fall into two categories: the “esteemed colleague” (helpful); the “witless wonder” (negative, and prone to crushing your paper).  Write a book, a play or an operatic score, and your critics in the media have a name.  You could even find out where they keep their pet rabbit.  They are accountable. Yet, editors of journals claim to have a “duty of confidentiality” towards those referees who opt for anonymity: guess which category most often does. At one time or another, most academics asked for critiques by learned journals only to recommend rejection have succumbed to “taking the veil”.  Equally, there are few researchers who have not suffered a similar fate to one they may have meted out themselves.  Learning by experience is not necessarily a strong point among scientists.  A typical case came to my notice recently, but the identity of one faceless and repugnant referee eventually became clear.  I know him well.  He too had suffered acute stress from a grossly delayed manuscript and the vicious comment of an anonymous referee some years back, yet saw fit to indulge his own spleen when offered a place in the shade: goodness only knows why, but in this case I have my suspicions.

The whole scientific community grows increasingly uneasy about anonymous peer-review, and the abuse that it sometimes makes possible. Examples are deliberate delays by unnamed referees engaged in similar research or related commercial activity, plagiarism, incompetence and the self-indulgence of gratuitously destructive and belittling comment.  It is the near-universal policy of referee anonymity that allows these unwholesome practices to fester and grow.  Most journals give their referees the option of coming out of the closet, or remaining smugly behind its door.  Some assume anonymity, so that a referee has to ask explicitly for their name to be revealed.  Anonymous referees are simply moral cowards, along with editors of the journals that give them a cloak. What do they fear?  Are direct questions about their comments cause for timidity?

Referee malpractice can be removed completely by editors refusing to allow referees to skulk behind anonymity. Now, in the UK at least, it seems possible to challenge this unwholesome editorial prerogative, because of the Freedom of Information Act 2000 (2002 Scotland), which came into force on 1 Jan 2005, and the Data Protection Act 1998.  Resorting to the Acts ought not to be necessary as regards the activities of scholarly journals, yet editors continue to defend the more faceless of their referees.  No doubt there would be a temporary shortage of referees should compulsory “outing” become the norm, but it would remove those who do engage in malpractice.  The most important result would be an increase in objectively constructive comment, which softens the blow of a rejection slip by showing a way forward to authors.   Peer-review should work both ways, and should be seen to be honest.

 

Pliocene climate and a lesson for the near future?

While most geoscientists use the products of processes that operate today to judge environments of the past, climatologists do the reverse: the past is the key to the present. While the climate record of the last 2.5 Ma is a key to understanding and perhaps even predicting rapid climate shifts during glacial-interglacial periods uncontaminated by human influences, such is the extent to which greenhouse emissions have affected the current climate that we have little idea what the outcomes may be. The possibility of greenhouse warming has become higher than in any previous interglacial epoch. To get even an inkling of what that might set in motion requires looking back to warmer times than the Late Pliocene and Pleistocene, at around 3 to 5 Ma. In the Early Pliocene it is very likely that CO2 in the atmosphere was no more than nowadays. Because the Earth’s geography was little different from the way it is now and the Milankovich forcing was the same too, modelling Early Pliocene climate might seem to result in similar patterns, but it doesn’t (Fedorov, A.V. et al. 2006. The Pliocene paradox (mechanisms for a permanent El Niño). Science, v. 312, p. 1485-1489). Sea level was some 25 metres higher than it is at present and mean global temperature was an extra 3°C, and sea-surface temperatures (from the oxygen isotopes in planktonic foraminifera) were high as well. Despite much the same forcing factors as today, the Pliocene lacked large high-latitude ice caps in Arctic regions. Milankovich-related fluctuations were damped down compared with those of the Pleistocene. Both modelling and geological evidence from the Early Pliocene suggests that Earth’s climate was dominated by a perpetual El Niño in the tropical oceans, because of an inability of cold water to upwell periodically along the western tropical margins of Africa and South America. Quite probably such conditions had persisted for the previous 50 Ma, despite gradual overall cooling.

Fedorov and colleagues point to very different Early Pliocene climates in several regions: Mild winters in central and north-eastern North America; droughts in Indonesia and torrential rains in western North and South America. Overall, it was a much more humid world, and since water vapour is a powerful greenhouse gas warmth and humidity were sustained despite no higher CO2 levels than now. At about 3 Ma, ocean surface waters began to cool, with signs that the alternations associated with El Niño and La Niña in the eastern Pacific began. An explanation for this is the gradual build up of very cold water deep in the ocean as a result of winds from continents cooling ocean surface water at high latitudes and causing it to sink. Without periodic upwellings, warm surface waters and cold deep waters could not mix, so inevitably the interface became shallower. At some critical depth, this thermocline could break surface, transforming both climate patterns and those of ocean currents, eventually to end up as the present tropical climate cyclicity which is connected with  other climate features of the Great Ice Age.

Fedorov et al  speculate that only a small descent of the ocean thermocline – a matter of a few tens of metres – could re-establish Pliocene conditions.  That might occur because of continued anthropogenic warming, and the ‘flip’ might be as quick as a few decades to centuries.

Accretion and core formation reviewed

Painstaking work on meteorites and their re-evaluation has only a small, non-specialist readership, but now and again developments in the science and its bearing on how the Solar System and its planets formed need a review. The latest of these (Wood, B.J. et al. 2006. Accretion of the Earth and segregation of its core. Nature, v. 441, p. 825-833) doesn’t deviate much from generally accepted ideas, except in detail. For a long while it has seemed inescapable that gravitational potential energy accumulated from accretion of mass, together with energy released by decaying short-lived isotopes formed by a supernova near the dust cloud that gave birth to the Solar System would have led to hot protoplanets. So core formation by segregation of dense immiscible metal and sulphide melts was likely to have been sooner rather than later – such melts form at lower temperatures than do those made of silicates.

The daughter isotope (182W) of one short-lived isotope (182Hf) is especially revealing in both meteorites and the Earth. Hafnium favours entry into silicates while tungsten has an affinity for metallic iron; they are siderophile. So, when metallic melts form in a silicate body the Hf/W ratio increases in the silicates. If that segregation occurs before most 182Hf has decayed – within about 45 Ma – then the silicate part will express an excess of 182W while metals have a deficiency. In the case of metallic meteorites, 182W is so low as to indicate segregation of the metal from silicate within less than 5 Ma of the ultimate origin of the Solar System. Inevitably, Earth would have incorporated some of these early-formed metallic parts during its accretion. Tungsten isotopes from terrestrial rocks, however, suggest that core formation lasted about ten times longer, and imply that this early metal re-mixed with silicate in the mantle during accretion, and formation of the core was a secondary product of heating of the growing planet. The mantle has an excess of siderophile elements, which poses a problem. There are three possibilities: core formation was never completed, some of these elements remaining locked in silicate; it took place while overall chemical conditions changed from reducing to oxidizing, so that the most siderophile ended up in the core during the reduced phase then less siderophile elements progressively favoured silicate entry as conditions became oxidising; as the Earth grew the pressure under which segregation of core materials increased. The third scenario invokes a deep ‘ocean’ of magma through which droplets of metal fell, equilibrating with silicate melt and then forming a pond on the ‘ocean’ floor, ultimately to descend as large masses.

Wood et al. examine these three scenarios in the light of recent data and planetary modelling, suggesting that the second was the most likely by a process of ‘self-oxidation’ as its size increased, perhaps linked with the formation of perovskite in the deep mantle once a limiting radius had been achieved. Such a heterogeneous accretion and core segregation would explain the disparity between estimates of the timing of the core from tungsten and lead isotopes (~12 and ~28 Ma respectively)   They also revisit the oddly low density of the liquid outer core – about 8% less than expected of an iron-nickel alloy, ascribing it to a mixture of the low-atomic weight elements, silicon, sulphur, carbon and hydrogen, with an unknown proportion of oxygen.

Evidence for strain build up along faults in southern California

In the centenary year of the 1906 San Francisco earthquake a lot of attention has been paid to the northern part of the infamous San Andreas Fault. That avoids the fact the its southerly extension to the south-east of Los Angeles has not ruptured in a devastating way for at least 250 years. Faults break after protracted build-up of elastic strain. Such strains are detectable using data from spaceborne radar systems. These have been available since 1992 from the European Space Agency ERS-1 and ERS-2 satellites. A sequence of data sets provides information about the annual rate of deformation (Fialko Y. 2006. Interseismic strain accumulation and the earthquake potential on the southern San Andreas fault system. Nature, v. 441, p. 968-971). Fialko shows that the parallel San Andreas and San Jacinto faults near the Salton Sea are building up strain at about 3 cm per year, so that about 7 to 10 metres will have accumulated since the last major earthquake in that part of the system. This exceeds the largest known seismic movement on the system, thereby suggesting that Los Angeles is likely to experience a ‘big one’ shortly.

Supervolcanoes

Outside of a major meteorite impact, the greatest danger posed by geological processes is a monster volcanic eruption. As well as the close-by effects of massive debris avalanches and ash falls, explosive eruptions blast sulphur gases into the stratosphere where they reside for a long time as sulphuric acid aerosols. Clouds of these tiny particles reflect a proportion of solar radiation back into space and so cause global cooling. The eruptions of Pinatubo and Krakatau in recent historic times did just that, as have several others with more devastating global effects such as famine. Yet these are tiny compared with eruptions known from the recent geological past that are marked by ash deposits over vast areas. About 71 ka ago, Toba in Indonesia  blasted out a 30 by 100 km caldera and its ash extends across much of south Asia and surrounding ocean floors. Genetic evidence from human Y-chromosomes suggests a massive decline in human numbers at the time, to create an evolutionary bottleneck. This near-extinction may have been connected in some way to eruption of the Toba supervolcano. Such events are a more likely risk than impacts, and a recent review of research into them highlights those that are well-known (Bindeman, I.N. 2006. The secrets of supervolcanoes. Scientific American, v. 294 (June 2006 issue), p. 26-33). The western USA has two potential threats: calderas in Yellowstone National Park and Long Valley. Between 760 and 640 ka both exploded to blanket the whole southern USA and northern Mexico with around 1000 cubic kilometres of ash. Bindeman’s own research sheds light on the details of magma evolution during such eruptions using isotopic signals in zircons contained within ash deposits..

Out of Africa and back again?

Humans left Africa with a meagre tool kits at a remarkably early date, possibly around 1.9 Ma from finds of primitive stone tools in Pakistan and Central China, and certainly before 1.7 Ma in the case of the now celebrated human remains at Dmanisi in Georgia and in Java. Around 1.7 Ma sites with evidence for human occupation extend from southern to north-western Africa and over 2/3 of the width of southern Eurasia. Despite the increased chances of preservation in later times, such a wide-ranging expansion seems not to have recurred until the fully modern human diaspora from Africa that began around 70 to 100 ka. Fossil evidence suggests that descendants of these earliest known migrants thrived until as recently as 20 ka in south-east Asia, and perhaps longer, if tiny Homo floresiensis prove to be other than symptomatic of congenital dwarfism. They represent a puzzle, and absence of evidence has deterred palaeoanthropologists from sticking out their necks, until a recent review of possibilities (Dennell, R. & Roebroeks, W. 2005. An Asian perspective on early human dispersal from Africa. Nature, v. 438, p. 1099-1104).

For a long time all human remains dated between 1 and 1.9 Ma were ascribed to H. erectus, whose type specimen hails from Java, not Africa. Anatomical re-evaluation of specimens from Africa, notably the famous, 1.6 Ma old Turkana Boy from Kenya, shows that they are sufficiently different from Eugéne Dubois’s Javan H. erectus type specimen to warrant a different species name – ‘Action Man’ or H. ergaster. The Dmanisi humans have close affinities, but are older. Therein lies one puzzle: apart from the very much more primitive (and very rare) H. habilis of east Africa, there is no obvious African candidate as an ancestor for H. ergaster there. Dennell and Roebroeks speculate that they migrated back to Africa after evolving there from some unknown earlier species. Another puzzle centres on the tools carried by the early migrants from Africa.

Simple chopper and rough flake tools first appear in north-east Ethiopia at 2.6 Ma, but with no clear sign of who made them. The first discovery of the earliest known tool kit was at Olduvai Gorge in Tanzania – hence their name, Oldowan. They are associated with remains of the earliest known human species H. habilis, but date only to 1.8 Ma. Since Oldowan tool use is now known to have extended over a huge range of Africa and Eurasia at that time, the original emigrants must have carried the culture with them sometime after its first appearance in Ethiopia at 2.6 Ma. The emblematic artefact of ‘H. erectus’ is the beautiful pear-shaped biface axe, yet it first appeared at 1.5 Ma in Africa, and did not make an appearance outside the continent until about 700 ka and never made it to east Asia until carried their by fully modern humans: it was an African invention. Oddly, these highly crafted tools are often found with little sign of wear, and indeed opinion about what they were for is divided.

The great problem in palaeoanthropology is absence of fossils, which is hardly surprising. Dennell and Roebroeks comment that most Late Pliocene to Early Pleistocene terrestrial faunas are nearly always of large, robust animals, and even they are uncommon. The ravages of erosion and transportation also make it difficult to date finds of stone tools, as they may have been mixed with younger dateable materials. With confidence, they rely on the old adage (not well liked by the Popperian school of scientific methodology) that, ‘Absence of evidence is not evidence of absence’, and also that the earliest evidence for a new migrant is bound to be younger than its first presence. They look to the palaeoecological record of the period, which suggests a vast extent of open savannah covering much of Africa and southern Asia in the period when the climatic effects of glacial-interglacial cycles had not gripped low latitudes to create the desert barriers of later Pleistocene times. For species adapted to savannah life there was little to prevent their very wide migration, indeed simple diffusion would have moved them across the entire savannah range. Once thought to be confined to the East African Rift, australopithecines have turned up as far afield as modern Chad, 2500 km away, and as long ago as 3.5 Ma. If such diminutive creatures with no tools could diffuse so far, then what might have been the geographic limitation to the earliest tool users? Moreover, diffusion has no direction in the area that presents its possibility: movement could have been back and forth. An intriguing point made by Dennell and Roebroeks is that climatic instability first appeared around 2.6 Ma in Central China, so any emigrants moving north would have been subject to greater evolutionary-selective pressures for longer. Homo ergaster might have evolved in Asia and returned to Africa in the face of worsening conditions. This approach raises as many plausible hypotheses as a stick can be poked at, and should re-vitalise palaeoanthropological research outside Africa as a means of testing them.

Dee also: Kohn, M. 2006. Made in Savannahstan. New Scientist, v. 191 (1 July 2006 issue), p. 34-39.

Detection of rifting due to dyke emplacement

The Afar Depression of NE Africa is a zone of complex continental rifting and nascent formation of new ocean floor that has been developing since the Late Oligocene, where the Red Sea, Gulf of Aden and Ethiopian rifts meet. Averaged out, the extension is at around 16 mm per year. In September and October 2005 small seismic events spread along about 60 km of a discrete segment of the Afar rifting system. Analysis of the vicinity of these earthquakes, using satellite-radar interferometry revealed an astonishing 8 m of extension in little more than a week (Wright, T.J. et al. 2006. Magma-maintained rift segmentation at continental rupture in the 2005 Afar dyking episode. Nature, v. 442, p. 291-294). This could not be accounted for by extensional faulting alone, indeed that would only add up to less than 10% of the motion. It seems likely that sideways injection of around 2.5 km3 of magma was responsible, forming a dyke extending from 2 to 9 km deep. Surface volcanism was barely noticeable, the event being represented by a small puff of felsic ash from a minor volcano while the dyke itself is twice the volume of the 1980 eruption of Mount St Helens

Near-pristine traces of life before Earth’s surface became oxidising

Only around 2.2 Ga did the atmosphere contain sufficient oxygen to oxidise iron(II) to iron(III) and leave its trace in red soils and terrestrial sedimentary rocks. That opened the way for the emergence and evolution of the Eucaryan domain of organisms, most of which depend on oxygen. For their predecessors, the prokaryote Bacteria and Archaea, oxygen would have been intensely toxic, especially for those which used anoxygenic forms of metabolism. Almost certainly oxygen was released for more than a billion years before the Great Oxidation Event, by blue-green bacteria, only to be mopped up by oxidation of abundant iron(II) ions dissolved in sea water. Getting an idea of the diversity of pre-2.2 Ga life is possible by examining the organic chemicals produced when they decayed under anoxic conditions, i.e. from oil and kerogen. Unfortunately, the great age of their host rocks has resulted in many Precambrian sediments having been heated and metamorphosed, so that different biomarkers break down into less distinctive compounds. There are, however, sediments that may have remained more or less unaffected, and one sequence in the Canadian Shield has yielded astonishing results (Dutkiewicz, A. et al. 2006. Biomarkers from Huronian oil-bearing inclusions: An uncontaminated record of life before the Great Oxidation Event. Geology, v. 34, p. 437-440).

The sediments are conglomerates rich in uranium, having been deposited under reducing conditions that helps precipitate uranium from solution, and have been mined extensively in the Elliot Lake area of Ontario. Oil seems to have entered fluid inclusions in quartz that cemented the conglomerates, shortly after the conglomerates were deposited at about 2.45 Ga. The oil contains a host of complex organic compounds that have never been degraded by heating. Some can be linked to blue-green bacteria, which undoubtedly created of oxygen continuously. That they gave rise locally to favourable conditions for oxygen-using organisms is clear from other biomarkers. Those are steranes that are derived by breakdown of sterols, which in turn are only known to be created by the enzymes exclusive to Eucaryan metabolism. Steranes have been found in even older sediments, but they were back shales that could easily have been contaminated by much younger organic materials seeping through the host rock. Oil in fluid inclusion within diagenetic minerals is far less likely to have been contaminated, so the Elliot Lake samples define a minimum age for the emergence of the Eucarya far earlier than the appearance of actual microfossils that show the distinctive cell nucleus that defines the domain Eukarya.

Precambrian bonanza for palaeoembryologists

Signs of relatedness among groups of organisms often show up well during their early growth as embryos, so their fossils in very old rocks are of great use in establishing when different groups emerged (see Ancient baby penis worm hits the news in EPN February 2004 issue). A deposit containing possible embryos of deutorostomes (see Age range of early fossil treasure trove, in EPN March 2005 issue), in which the first orifice to emerge during embryonic development is the anus, is of considerable interest. Nowadays, the group contains animals with mirror symmetry (bilaterians), including the vertebrates. First reports of fossil embryos from the 580 Ma old Doushantuo Formation of southern China in 2004 drew fire from palaeontologists who preferred to believe that the smooth almost spherical objects, like the fictitious life forms in a supposedly Martian meteorite, were probably oolith-like mineral growths. Undeterred, their finders have extracted yet more from the exposures (Chen, J-Y. and 12 others 2006. Phosphatized polar lobe-forming embryos from the Precambrian of southwest China. Science, v. 312, p. 1644-1646). They demonstrate clearly that the objects do show lobes in an early stage of development that break the embryos initial symmetry so that different kinds of tissue can develop to form adults. The find matches well with evidence from the genes of modern bilaterians that the basic branching of the Animal Kingdom occurred well before the Cambrian Explosion of shelly fossils. Since more or less all modern phyla are represented by Cambrian fossils, that is not surprising.

Pocket sauropods

The largest animals to roam the land were vegetarian dinosaurs of the sauropod group. The biggest reached a length of more than 30 metres, and were commensurately tall. These giants permeate our perception of Mesozoic life on the continents, along with their monster predators. Now, children made nervous by such titanic creatures (and I was definitely one of them) can be reassured that there were ones that were not so crushingly big (Sander, P.M. et al. 2006. Bone histology indicates insular dwarfism in a new Late Jurassic sauropod dinosaur. Nature, v. 441, p. 739-741). A near-complete skeleton of a sauropod that was only 6 metres long turned up in Lower Saxony in Germany, along with other remains suggesting individuals as small as 1.7 m. Europasaurus was first thought to be a juvenile of a much larger species, but Sander et al. developed means of microscopic bone analysis that clearly show fully mature bone growth. In the Late Jurassic central Germany was covered by sea, except for a number of large islands. The most likely explanation for such a tiny species is that it adapted to island life in much the same way as other, more recent mammals did, such as pigmy elephants and hippos on many islands in the Mediterranean and the Indonesian archipelago.

Hydrogen isotopes test uplift hypotheses

When Cenozoic mountain belts and high plateaux began to rise and be eroded has become a disputed topic about most of them, such as the Himalaya and Tibetan Plateau, the North American Western Cordillera, the Andes and the Ethiopian Plateau. A host of techniques have been used, including plant-leaf stomatal indices, the bubbles in lavas, cosmogenic isotopes and various stratigraphic approaches. For the Tibetan Plateau (see When did Tibet rise? and Tibetan uplift: looking a gift horse in the mouth in the March and May 2006 issues of EPN) opinion is polarised: as soon as India collided with Asia, around 40-50 Ma ago, due to crustal thickening; as a result of a slab of lithosphere delaminating from the region as recently as the Late Miocene (8-10 Ma), when the crust rose gravitationally. There is support for both hypotheses. Much the same divergence of opinion applies to the Sierra Nevada of the Western USA, which may have been a major feature throughout the Cenozoic, or subject to delamination in the Pliocene (3 to 5 Ma ago). In its case, a new way of estimating topographic elevation in the past may resolve the disputation (Mulch, A. et al. 2006. Hydrogen isotopes in Eocene river gravels and paleoelevation of the Sierra Nevada. Science, v. 313, p. 87-89).

The Stanford University group led by Andreas Mulch have focused on the way in which the proportion of deuterium (2H) in rainwater changes as clouds rise over high areas. This is known quite precisely from modern hydrological studies. Of course, you cannot find ancient rainwater ponded in the place where it once fell, but that rain does find its way into clay minerals during weathering. The western flank of the Sierra Nevada is mantled by extensive Eocene graves deposited by rivers that drained the area now occupied by the mountains. Handily, those gravels were the main target for the 1849 California Gold Rush and subsequent alluvial gold mining, so they have been well exposed by the prospectors throughout the Sierra Nevada. At high elevations they are preserved in river terraces, so it is possible to trace roughly the ancient drainage courses and sample a range of modern elevations. The hydrogen isotope data from kaolinite in cobbles of weathered granitic rocks are extremely interesting. They show that the Eocene rainwater that entered kaolinite molecules at different modern heights had fallen at a very similar range some 50 Ma ago. There seems little doubt that the Sierra Nevada had risen more than 2 km before the Eocene

Has Dune been discovered?

Titan, where Kurt Vonnegut’s Sirens sang, is, as we all know, a foggy world shrouded in hydrocarbons. The Huygens probe that sank to its surface revealed a tantalising glimpse of its strangeness, with possible erosion by liquid methane rivers and sediments of icy substances. But Huygens didn’t really tell us much, like the probe that lasted a few minutes on equally obscure Venus. To map a foggy world you need orbital radar. The Cassini mission, the mother ship for Huygens, carried a high-resolution radar imaging system, and the results are astonishing; Titan has monster sand dunes (Lorenz, R.D. and 39 others 2006. The sand seas of Titan: Cassini RADAR observations of longitudinal dunes. Science, v. 312, p. 724-727). They dwarf all but the largest terrestrial dunes in Namibia, rising to 200 m. They are linear dunes, spaced at around 4 km, and trend parallel to Titan’s Equator, where there must be a wind belt. So far only a few images have been returned, so the extent of the dune systems is unknown.  However, they correlate with optically dark material that is extensive in the equatorial region, so Titan may be dominated by dunes. For dunes to form presupposes an abundant supply of particles small enough to be picked up and transported by winds. The images from different latitudes suggest that transport is equatorwards. What those particles are made of is impossible to tell from radar returns, but most likely they are either organic solids or ice. Notions of Titan being bathed in hydrocarbon oceans now fall flat, as the areas that are not dunes seem to be topographic highs.

Folds in the mantle

Seismic tomography – the processing of records of  seismic waves from many earthquakes that arrive at the world-wide network of receiving stations – continues to add detail to structures in the mantle. It is based on 3-dimensional mapping of variations in wave speeds that gives clues to variations in temperature and rheological properties at depth. One of its most fascinating outcomes has been the detection of thick, steeply dipping sheets of anomalous material well below the 660 km mantle discontinuity where earthquakes cease to occur, i.e. where the whole mantle behaves in a ductile manner. These show signs of linkage to near-surface destructive plate margins, and have been ascribed to lithospheric slabs that continue to be subducted as discrete entities to as deep as the core-mantle boundary (CMB). If that were the case, it follows that their accumulation in this D” region might displace other deep material laterally, perhaps to set mantle-wide convective plumes in motion.

One such sheet occurs deep beneath the Caribbean, and is attributed to the remnants of  a lithospheric plate, once forming the foundation of the eastern Pacific, which ceased to form once North America had overridden the East Pacific Rise. By analogy with the 160 Ma width of the West Pacific plate, this one would have been sufficiently extensive to reach the CMB once subducted. New tomography beneath the region no only suggests that it did, but that in doing so it accumulated as a heap of buckled material (Hutko, A.R. et al. 2006. Seismic detection of folded, subducted lithosphere at the core-mantle boundary. Nature, 441, p. 333-336). The reconstruction from tomographic results is highly reminiscent of the folding that occurs when honey or treacle is tipped into a tumbler of hot tea and falls to the bottom.. If the interpretation is correct, part of .the D” zone is made up of gigantic recumbent folds of former oceanic lithosphere.

Afar and the African superplume

Seismic tomography has also played a role in mapping zones in which hot, low-density mantle is likely to be rising – a contribution to understanding how plumes give rise to near-surface hot spots and major intra-plate volcanism. One of the largest active and long-lived zones of such thermal and magmatic activity is that of Ethiopia and Yemen, connected somehow with the opening of the Red Sea, Gulf of Aden and the East African Rift system; the Afar plume. This began about 45 Ma ago in Kenya and southern Ethiopia, reached its climax with the rapid extrusion of vast continental flood basalts of the Ethiopia-Yemen province around 30-26 Ma, and continues today in the Afar Depression. Thought by some to be a classic example of how a single upwelling of hot, low-density mantle generated a magmatic and tectonic hotspot, an alternative view is that the Afar plume is a mere near-surface part of a vast and complex system of anomalous mantle beneath the whole of southern and eastern Africa. Tomography based on the world-wide network of seismic observatories is unable to resolve the matter one way or the other. Geophysicists of the Pennsylvanian University and Carnegie Institution in the USA have analysed data from a more closely spaced network of temporary seismic stations around the famous RRR triple junction of Afar (Benoit, M.H. et al. 2006. Upper mantle P-wave speed variations beneath Ethiopia and the origin of the Afar hotspot. Geology, v. 34, p. 329-332).

The results outline a wide (>500 km), elongated region of low P-wave speeds below 400 km that trends south-west from Djibouti, roughly parallel to the Ethiopian Rift. This is far too large to represent a classic plume, whose tails are thought to be no more than 100-200 km diameter, and whose heads on reaching the base of the lithosphere are no more than 100-200 km thick, despite spreading laterally to a radius of up to 2000 km. The huge structure is more consistent with a broad mantle upwelling that penetrates down to the lower mantle. Lower-resolution tomography does show anomalous low-speed mantle in a broad zone, which is deep in the mantle below southern Africa then rises obliquely towards the vicinity of Afar. The more detailed results support the influence of this African ‘superplume’.

Crustal spreading from the Tibetan Plateau

In the mid 1970s Peter Molnar and Paul Tapponnier proposed that the active tectonics of eastern Asia were driven by gravitational collapse and lateral spreading of the huge mass of thickened crust that had accumulated beneath Tibet after India collided with Eurasia. The driving forces for such lateral spreading are variations in gravitational potential energy (GPE) due to regional differences in surface elevation. In the oceans, such GPE adds to plate driving forces as sliding from oceanic ridge systems that are elevated relative to abyssal plains because ridges are underlain by warmer, lower density oceanic lithosphere. Partly because the continental surface is not covered by water up to 4 km deep, the stresses resulting from GPE associated with Tibet’s high elevation are about twice as large as those connected with ridge slide. Computing the variations in GPE in eastern Asia and the adjoining oceans allows the magnitudes and directions of stresses due to gravitational spreading to be mapped (Ghosh, A. et al. 2006. Gravitational potential energy of the Tibetan Plateau and the forces driving the Indian plate. Geology, 34, p. 321-324).

One of the oddities discovered by Ghosh et al. is that the dominant stresses resulting from GPE differences in Tibet are oriented N-S and would tend to cause crustal spreading in those directions. Yet the surface of the Tibetan Plateau is riven with numerous N-S normal faults that indicate current spreading in E-W directions, as Molnar and Tapponier surmised. Somehow the N-S gravitational extension forces must be cancelled out, probably by traction between the lithosphere and motion of the underlying mantle driven by sea-floor spreading from the ridges in the Indian Ocean. One possibility is that the known buckling and thrusting within the oceanic part of the Indian Plate is a reflection of this balance. However, the stresses that emerge from the GPE calculations are simply not large enough to account for this intraplate deformation.

Implications of a mismatch between hominin genes and bones

Finds in Kenya, Ethiopia and Chad during the first few years of the 21st century suggest that bipedal hominins, perhaps on the human clade, emerged as long ago as 7 Ma. Even using the previously accepted molecular-clock age for separation of chimpanzees and hominins, this is dangerously close to the time of the last common ancestor of both (5-10 Ma). Results from comparison of more detailed chimp and human genomics (Paterson, N. et al. 2006. Genetic evidence for complex speciation of humans and chimpanzees. Nature, doi:10.1038/nature04789, online) throw up a bewildering series of possibilities. On Patterson et al’s reckoning, our descent split from that of our nearest relatives no more than 6.3 Ma ago and perhaps as recently as 5.4 Ma, implying an overlap between tangible evidence and that based on DNA. Of even greater concern is the fact that human and chimp X-chromosomes are more similar than the rest, and seem to have diverged even later. One way in which this greater similarity could have arisen is if natural selection had been operating more strongly on X-chromosome genes, which studies of other related species show to have stemmed from hybridisation. Genes found on X-chromosomes that make hybrids less fertile can create strong selection pressures on this chromosome. An explanation that takes into account the young date of apparent splitting and strong selection operating on X-chromosomes is that the actual speciation(s) did take place before the time when the oldest hominin fossils were preserved, but that there was common interbreeding between the two closely related lines. 

Understandably, palaeoanthropologists and geneticists are arguing heatedly, but failing to recognise the great differences between fossils and extant genetic evidence: each is bound to tell a different part of the story. Yet another is the ecology connected to either lineage, the end point being a regional separation into creatures of forest and open savannah, separated by considerable distances in Africa – basically west and east of the East African Rift system. Before that climatic and vegetation-cover schism what would there have been to stop a great many branchings from either lineage of very closely related animals? The rarity of fossils from either may leave the true relationships early in the history of both clades completely impenetrable. One thing is for sure, although chimps and humans today do make close friendships, that is as far as it goes…

See also: Holmes, B. 2006. Did humans and chimps once merge?. New Scientist, v. 190 20 May 2006, p. 14. Pennisi, E. 2006. Genomes throw kinks in timing of chimp-human split. Science, v. 312, p. 985-986.

Hobbit matters

Debate about the significance of the tiny hominid fossils from the Indonesian island of Flores (H. floresiensis) continues to escalate. The remains are sufficiently complete for analysis of other things than size and morphology of skull and brain. It seems that the shoulder structure is different from that of modern humans, but more similar to that of full-sized H. erectus (see Culotta, E. 2006. How the hobbit shrugged: tiny hominid’s story take a new turn. Science, v. 312, p. 983-984). In ourselves, when standing straight, our inner elbows face slightly forwards so that we can work with both hands in front of the body. The necessary twist in the humerus is somewhat less in H. floresiensis, and by itself that would inhibit being able to make tools. However, the shoulder bones of the fossil articulate differently with the hobbit humerus so that a hunched posture would allow intricate work, but not an overarm throwing action. Much the same features characterise the well-preserved upper bodies of H. erectus fossils from Africa and Georgia. Incidentally, like J.R.R Tolkien’s fictional Hobbit, H. floresiensis also had disproportionately large feet.

It seems inescapable that H. floresiensis did make tools. As well as the 90-12 ka artefacts found in the Liang Bua cave with the hominid remains, which some have reckoned to be too complex for the small people to have made the, large numbers of similarly sophisticated stone tools have been found at other sites in Flores. These occur with similar prey species, but not hominid remains, from as long ago as 800 ka; a time at which only H. erectus was present in the Indonesian archipelago (Brumm, A. et al. 2006. Early stone technology on Flores and its implications for Homo floresiensis. Nature. V. 441, p. 624-628).

The minute size of H. floresiensis, with a brain capacity of a mere 400 cm3, continues to cause some researchers to doubts that the fossils – in fact 9 sets of remains from Luing Bua – were other than congenitally deformed modern humans: microcephalics. Anatomist Robert Martin of the Chicago Field Museum of Natural History (see www.sciencemag.org/cgi/content/full/312/5776/999b) used scaling factors of other dwarfed mammals from island faunas to model the body versus brain size to be expected for similarly dwarfed hominids that might arise from isolated H. erectus. He calculated that the 400 cm3 brain of H. floresiensis should be associated with a creature with around 11 kg body mass: about the size of small monkey. But that conflicts with the fact that the famous skull shows no signs of other deformities associated with microcephaly (See Culotta, E. 2006. How the hobbit shrugged: tiny hominid’s story take a new turn. Science, v. 312, p. 983-984).

The Younger Dryas and the Flood

Between about 12.9 and 11.5 ka the progress of warming from the frigidity of the Last Glacial Maximum was rudely interrupted. For over a thousand years conditions returned to those of a mini ice age, with continental glaciers re-advancing on a large scale, an increase in aridity and a reversal of colonisation of high northern latitudes by both plants and humans. Pollen records become dominated by those of a diminutive alpine plant, the mountain avens (Dryas octopetala) from which the cold snap gets its name – the Younger Dryas. The pace at which cooling took place was dramatic, and glacial conditions swept in within a decade at most. The most likely scenario is failure of North Atlantic Deep Water to form, thereby shutting down the thermohaline circulation that draws the warming Gulf Stream into the Arctic Ocean off the northern cape of Norway. The reason for that was a massive and sudden freshening of surface water at high latitudes in the North Atlantic, but where the influx of fresh water came from is a puzzle. Wallace Broeker of the Lamont-Doherty Earth Observatory in New York State resurrected an earlier idea that a vast lake of meltwater in the region of the Great Lakes of North America burst down the St Lawrence Seaway, instead of quietly escaping to the Gulf of Mexico along the Missouri-Mississippi system. Broeker has recently reviewed this hypothesis (Broeker, W.S. 2006. Was the Younger Dryas triggered by a flood? Science, v. 312, p. 1146-1148).

Oxygen isotope records from sediments in the Gulf of Mexico had been recording massive influx there of water depleted in 18O; a sure sign that the Mississippi was carrying much of the water produced by melting of the Laurentian ice sheet. That signature stops abruptly at the outset of the Younger Dryas. The meltwater must have found another outlet, but so far its oxygen isotope signature has not been conclusively discovered. As well as the St Lawrence escape route there are three other possibilities: north-westwards along the MacKenzie River valley; beneath the great ice sheet and through Hudson Bay; and by massive break-up of the ice sheet to launch an ‘armada’ of icebergs that quickly melted to freshen northern Atlantic waters. One of the clearest signs that vast proglacial lakes suddenly emptied is that they carve immense channels resembling canyons, in which there is abundant evidence for extreme scouring. Examples are the ‘channelled scablands’ of the state of Washington, and the Minnesota River valley. The volume escaping at the start of the Younger Dryas would have been so immense that such overflow channels would be dominant features of northern North America’s terrain; but there are few that fit the bill, and those that do exist are poorly constrained by radiocarbon dating. The lack of accurate dates for sediments and channels associated with the demise of the Laurentian ice sheet is the main obstacle, and surely evidence for exactly how the sudden plunge into glacial conditions was triggered will emerge sooner rather than later. One thing seems certain, the Younger Dryas was a freak event. The new ice core from Antarctica (see Yet further back in the Antarctic ice in the December 2005 issue of EPN) penetrates the previous six glacial maxima and shows no sign of a similar event at their terminations.

Sedimentary evolution of the Arctic Ocean: a start is made

For the Northern Hemisphere, especially around the North Atlantic, what happens in the Arctic exerts a strong influence over climate. On the one hand, ice-cover increases the proportion of solar energy that is reflected back to space, giving a cooling effect. On the other, cooling and increasing salinity of high-latitude water at the ocean surface results in its sinking to draw in warmer waters from further south, to extend warming further north. The two are linked intricately, for sea-ice formation adds to surface waters’ salinity. How and when the delicate balances arose remained poorly known while thick sea ice prevented ships penetrating to the highest possible latitudes in the Arctic Ocean, because the key to climate evolution depends on access to long core through ocean-floor sediments. Ironically, the decrease in Arctic ice cover with global warming has created greater access by icebreakers and drilling vessels. A consortium of countries around the Arctic funded a major effort to resolve the gap in knowledge through such a marine drilling programme in 2004. Results from the polar expedition have just begun to emerge (Moran, K and 36 other 2006. The Cenozoic palaeoenvironment of the Arctic Ocean. Nature, v. 441, p. 601-605). The cores were taken almost at the North geographic pole on the Lomonosov Ridge, a sliver of continental crust separated from its connection with the northern Russian continental shelf when North Atlantic sea-floor spreading nosed into the Arctic about 57 Ma ago.

The core is from sediments deposited on the Lomonosov ridge since it became detached from Russia, and is over 400 m long. Analyses are not yet complete, and the report by the IODP Arctic Coring Expedition covers the simplest parameters to determine: sediment bulk density and lithology, and micro-organisms. Nonetheless, these preliminary results provide a major surprise. Previously it was believed that frigid conditions in northern polar regions became established long after the Antarctic developed an ice cap 43 Ma ago, which matches the Cenozoic fall in atmospheric CO2 and other evidence for lower mean global temperatures. The first glaciation in the Arctic was thought to be at 2-3 Ma, when pebbles dropped by icebergs first appear in the cores from the North Atlantic floor. In the Arctic Ocean core, such pebbles appear at much the same time as those around the Antarctic. They become widespread by 14 Ma. At the time of the Palaeocene-Eocene global warming, in response to massive methane emissions at 55 Ma, the Arctic waters were as warm as 18°C. The record is one of transition from a greenhouse world to an ice house. Surprisingly, considering the later influence of thermohaline processes that draw in warm water from lower latitudes, the earliest period is marked by fresh or at most slightly brackish waters. That was probably a result of isolation from the Atlantic and an excess of precipitation over evaporation. The early sediments record abundant carbon, then at around 14 Ma, the percentage of buried organic carbon drops dramatically to mark the start of increasing frigidity, when icebergs dropped significantly more debris in the Arctic Ocean.

HOW THE AMAZON FORMED

The world’s largest drainage system in the Amazon basin is so huge that it might seem to be an eternal feature of South America, at least since that continent formed when opening of the South Atlantic wrenched it from Africa in the Triassic. The upper Amazon takes much of its flow from rainfall in the eastern slopes of the Andes, but that range is still in the process of formation by tectonic and volcanic forces. A review of the Amazon’s evolution in a recent issue of Scientific American (Hoorn, C. 2006. The birth of the mighty Amazon. Scientific American, v. 294 May 2006, p. 40-47) shows that the river system is much younger than you might have expected. Lots of evidence points to the major eastward flow only beginning in the late Miocene, after 15 Ma ago. Before that drainage was northwards into the Caribbean, the reason being that the north-eastern Andes of Columbia and western Venezuela had not formed. When they did begin to rise, they hindered flow to create a huge wetland in what is now eastern Columbia. Eventually a northward drainage route was definitively blocked, so that flow took the easiest remaining route to the ocean; eastwards, to create the Amazon basin.

San Francisco centenary

That 18 April was 100 years since the Magnitude 7.9 earthquake that raised San Francisco to the ground and killed more than 3000 is no cause for celebration. Yet it focussed seismologists to commemorate the event, as if that was necessary following hard on the heels of two of the most shattering natural events of the last century. In fact San Francisco created the science of seismology, rocking as it did the most vibrant city in the world’s emerging superpower. It brought the San Andreas Fault into common parlance, and research on that huge and structurally odd fracture – one of the largest transcurrent systems on the continent – played a major role in the development of plate tectonics. In the US, a century of attention to seismic hazards has made it, along with Japan, the leader in attempts to forecast earthquakes and subdivide half a continent in terms of seismic risk (see Here is the earthquake forecast in the July 2005 issue of EPN).

The 1906 San Francisco earthquake is reviewed in issues of three generalist journals (Lubick, N. 2006. Breaking new ground. Nature, v. 440, p. 864-865. Holden, C. 2006. Reliving the ‘Frisco quake. Science, v. 312, p. 345. Marshall, J. 100 years on, you’d think San Francisco would be ready. New Scientist, v. 190 15 April 2006, p. 8-11). In each, different graphics show the estimated risk of earthquakes and the degree of seismic hazard in relation to the many large faults in California. Yet the Sumatra-Andaman earthquake that set the Indian Ocean tsunamis in motion on 26 December 2004, and that in Kashmir in October 2005, between 20 and 40 times more energetic than San Francisco, killed hundreds of times more people and devastated the lives of millions more. As well as more widely deploying well-known, sensible and moderate-cost measures to build and site habitations more safely as regards the shaking effects of seismic waves, a great deal is left to learn about the global nature of earthquake hazard. A first step is better understanding the actual processes to which great earthquakes are related, and lessons are beginning to stem from the research on the Sunda subduction zone, whose movement unleashed terror around the entire Indian Ocean (Briggs, R.W. and 13 others 2006. Deformation and slip along the Sunda megathrust in the great 2005 Nias-Simeulue earthquake. Science, v. 311, p. 1897-1901). The Nias earthquake involved failure of the Sunda subduction zone in a 400 km gap between that affected by the Sumtra-Andaman event of 2004 and a stretch further to the SE that had three great earthquakes between 1797 to 2000; i.e. a previously quieter sector had succumbed to tectonic forces. That emerged from seismic analysis at the University of Ulster (see Yet more Indian Ocean earthquakes? Sadly, yes in the April 2005 issue of EPN). Briggs et al. examined hundreds of patches of coral reef around the islands of Nias and Simeulue, using preciseGPS measurements of the elevation of coral heads that had been uplifted and killed by exposure to the air. Their results show that uplift was as high as 3 metres with some areas subsiding by around a metre, but the total movement by thrusting beneath the islands was of the order of 11 metres.

Tibetan uplift: looking a gift horse in the mouth

The old saying stems from it being possible to tell the age of a horse, indeed that of a number of herbivores, from the number of dark and light bands that show on the worn surface of its teeth. Because grasses contain abrasive material, such animals’ teeth grow throughout their lives, different coloured material being laid down depending on the time of year. But there is a great deal more to this annual layering, from a chemical standpoint. By looking at various isotopes that are incorporated into enamel and dentine, it is possible to say where a horse – or a human for that matter – once lived (from variations in strontium-isotopes proportions for instance), and what it ate. The second forensic sign can be worked out from the carbon isotopes that a tooth has picked up during growth. Grasses have different proportions of carbon isotopes than those of other kinds of plans, such as shrubs and trees, the one depending on the so-called C3 type of photosynthesis and grasses on the C4 process. Each takes up carbon isotopes in measurably different proportion (d 13C in grasses is significantly lower than it is in C3 plants). Using carbon isotopes from teeth of fossil vegetarian animals is therefore a useful way of checking on the past proportions of grasses and other plants – often controlled in some way by climate. Neogene sediments of the Tibetan side of the High Himalaya contain abundant vertebrate faunas, and in view of the controversy over when the Tibetan Plateau began rapidly to rise (see When did Tibet Rise? in March 2006 issue of EPN) their dental geochemistry is a potentially useful approach to take. New results are somewhat at odds with those from other methods (Wang et al. 2006. Ancient diets indicate significant uplift of southern Tibet after ca. 7Ma. Geology, v. 34, p. 309-312).

Previous work using another approach (see When did Tibet Rise? in March 2006 issue of EPN) strongly suggests that southern Tibet was above 4 km elevation as far back as the Middle Eocene (40 Ma). Carbon isotopes in the teeth of Late Miocene Tibetan horses and rhinoceroses show that they ate a great deal of grass, unlike the modern yaks and wild herbivores that have to browse C3 plants. Wang and co-authors interpret this to signify that the southern Tibetan Plateau was considerably warmer than today, and also much lower: maybe around 2.5-3.5 km rather than the present 4 km or more. For elevation to change by 1-2 km in 7 million years suggests remarkably rapid uplift late in the evolution of the Plateau and adjoining Himalaya. Grasses, however, depend on both higher temperature and greater rainfall, but also on reduced CO2 in the atmosphere. They increased in their global cover only since about 8 Ma ago, when CO2 began to decline and climate cooled globally. Would it be possible for changes in the Asian monsoon to have had an effect on Tibetan vegetation, thereby explaining to dental evidence? Tibet is as dry as it is, because the monsoons now lose all their moisture in rising over the high Himalaya. If moist air and therefore cloud found its way into Tibet during the Miocene, maybe it would have been warmer too.

Mantle behaviour and the influence of minerals

To most geologists minerals are a means to an end. Identifying them and working out their relative proportions in a rock provides a quick means of assessing its rough chemical composition. Textural relations between minerals help work out the sequence of processes that were involved in its evolution, and in the case of metamorphic minerals what pressure and temperatures were involved. In the case of the Earth’s mantle, however, mineralogy comprises only one or two abundant minerals – olivine and pyroxene at shallow depths, and the mineral perovskite (MgSiO3) at depths greater than about 670 km – and dominates the mantle’s physical properties and bulk behaviour. There are distinct, narrow zones or discontinuities that separate different seismic properties and these have long been considered to represent changes in mineralogy of the more or less uniform bulk composition of the mantle. The most likely phase transition is from olivine + pyroxene to perovskite, in response to increasing pressure, thought to occur at about 670 km down. That transition was confirmed by high-pressure experiments, but whether that simple mineralogy persists down to the outer core has remained a mystery. Using tiny diamond anvils in a laser-heated furnace to create the enormous pressures at depths up to 2700 km is fraught with technical difficulties, but Kei Hirose and Shigeaki Ono of the Japan Marine Science and Technology Centre have finally achieved them (see Cyranoski, D. 2006. Magical mantle tour. Nature, v. 440, p. 1108-1110).

Hirose and Ono discovered that perovskite itself collapses to produce another, more tightly-packed molecular structure – post-perovskite with a sheet-like structure. This phase transition occurred experimentally under conditions that characterise the thin D” layer just above the core-mantle boundary. Seismic tomography has suggested that a number of weird things happen there. For instance, seismic S waves near the CMB have different speeds according to their direction of travel, and even accelerate in some parts. The platy structure of post-perovskite, unlike the more regular perovskite, is likely to create such physical anisotropy, especially if grains are aligned. The mineral, when iron enters its structure, may also help to explain thin (5-40 mm) zones in the D” layer in which seismic wave speeds fall by 5 to 30% compared with expected values (Mao, W.L. et al. 2006. Iron-rich post-perovskite and the origin of ultralow-velocity zones. Science, v. 312, p. 564-565). When first detected by seismic tomography, these zones had been assumed to involve regions in which partial melting occurred. It also seems that the phase transition is temperature- as well as pressure-dependent, so that post-perovskite could form at shallower depths in cooler regions. Being denser than its parent, that could result in sinking: like slab-pull at shallow depths, such a gravitational force would contribute to whole mantle convection by displacing hotter D” material. That in turn would ‘flip’ through the phase transition in the reverse fashion to become less dense, perhaps encouraging the initiation of rising plumes.

Sure enough, what might seem to be a boring bit of exotic mineralogy promises to exert some control over speculation on what happens at the bottom of the mantle. But it is too early to say how seminal the discovery might be – the errors in the experiments correspond to a depth range of about 350 km. On top of that, other experiments need to be conducted under these extremely difficult conditions, such as finding out if post-perovskite can chemically interact with the iron-rich outer core, and if its electrical properties are in some way different from those of better-understood perovskite.

A fish-quadruped missing link

Rich as the fossil record is, it is terribly incomplete, for the obvious reason that the chance of preservation over fragmentation and destruction of body parts is extremely small. That is especially the case for the high-energy and oxidising land and freshwater environments. Each fossil species can easily be assumed to be a one-off, appearing, thriving for a short while and then disappearing: ripe for the assumption of divine creation, as Linnaeus assumed. Very rarely indeed, specimens emerge that fill in the many gaps needed by evolutionary theory, the most celebrated being Archaeopterix that bridged the gap between dinosaurs and birds. That transition has been enriched by a whole series of older fossils from Chinese lagerstätten that show the transition in sublime detail.

The comparative anatomy of fish and land vertebrates suggests a common ancestry, and the Devonian to Early Carboniferous terrestrial record has yielded tantalising fish with lobed fins (e.g. Eusthenopteron and Panderichthys) and almost fish-like animals with four rudimentary limbs (e.g. Acanthostega and Ichthyostega). Yet a gap remained to be filled in the apparent transition from aquatic to land-dwelling vertebrates. US palaeobiologists engaged in seeking candidates from the Late Devonian of Arctic Canada have found one that reduces any uncertainty tremendously (Daeschler, E.B et al. 2006. A Devonian tetrapod-like fish and the evolution of the tetrapod body plan. Nature, v. 440, p. 757-763. Shubin, N.H. et al. 2006. The pectoral fin of Tiktaalik roseae and the origin of the tetrapod limb. Nature, v. 440, p. 764-771). The fossil, prepared with lengthy and painstaking care, shows such amazing anatomical detail as to demonstrate clearly that the fin and shoulder girdle are indeed intermediate between fish and tetrapods, whereas previous candidates supporting a transition are either definitely fish or tetrapods. Tiktaalik slots nicely into the time gap too, about 2 Ma younger than the most tetrapod-like fish Panderichthys and slightly older than fish-like quadrupeds. The outcome of a deliberate search for an animal to fit the gap, Tiktaalik above all demonstrates the predictive capacity of palaeontology, which counters a common epithet flung by those bent on divine intervention and/or intelligent design. Based on this outstanding success, fossil hunters will be encouraged to sift on a stratigraphically finer scale for yet more steps in vertebrate evolution, including our own.

See also: Ahlberg, P.E. & Clack, J.A. 2006. A firm step from water to land. Nature, v. 440, p. 747-749.

Hominid evolution: a line or a bush?

From the late 19th century it has been clear that two species of our genus Homo inhabited Europe and the Middle East: modern humans and Neanderthals. Recent partial sequences of Neanderthal genetic material, compared with the human genome, confirm that the two did not interbreed; at least, no trace of Neanderthal genetics remains in that of modern humans. The discovery in Indonesia that fully modern immigrants occupied the same territory as Homo erectus from 70 to 20 thousand years ago adds more weight to the hypothesis of multiple occupancy of the world by different kinds of humans until recent times. The astonishing discovery in 2003 of the remains of tiny hominids (Homo floresiensis) on Flores whose occupancy lasted from at least 840 ka to as recent as 12 ka (see The little people of Flores, Indonesia, November 2004 issue of EPN) confirms mixed occupancy late in hominid evolution. That includes several different representatives of Homohabilis, eragster and erectus – and also paranthropoids in Africa around 2 Ma years ago. As regards Homo, this cohabitation, especially that in Africa, supports two hypotheses: that our lineage was bush-like and involved separate extinctions and sudden appearances of new species (cladogenesis), or that the great variability in physiognomy (polymorphy) of modern humans extended back for a considerable time. The second is the view of Jonathan Kingdon, who believes insufficient hominid fossils have been collected to rule out polymorphism among tool-using and tool-creating beings. The idea of a single lineage since the first appearance of bipedal apes that led unerringly through gradual changes to modern humans (phyletic evolution) has been largely discarded. For at least part of the 6-7 Ma hominid record, that abandonment of phyletic evolution may have to be reconsidered, following a report of remarkably productive excavations in the Awash Valley of NE Ethiopia (White, T.D. and 21 others 2006. Asa Issie, Aramis and the origin of Australopithecus. Nature, v. 440, p. 883-889).

The Middle Awash is the single most productive area for hominid remains and other fossils that help establish changes in their environment. That is so because of consistent collecting for more than two decades by a multinational team, co-led by Ethiopian and US palaeoanthropologists, from a sequence of flood plain sediments over 1 km thick, liberally interlayered with dateable volcanic horizons. Its middle parts record three species, Ardepithecus ramidus, Australopithecus anamensis and Australopithecus afarensis (of which ‘Lucy’ was a member), in an age range from 4.42 to 3.88 Ma. White and the other members of the team have unearthed 30 new fossils of all three species, but, so far, no examples of more than one in a particular thickness of sediments. Of course, ‘absence of evidence is not evidence of absence’, but this massive addition to the Pliocene hominid record is a challenge to the prevailing hypothesis of cladogenesis – Steven J. Gould’s idea of punctuated equilibrium, in which species arise by sudden appearance of new characteristics from earlier ancestors. Its test is whether or not ancestral species co-exist with new species for a time. In the Middle Awash, it seems that they do not, even though the critical 300 m of sediments represents only 200 thousand years.

The three species, and their predecessor Ardepithecus ramidus kadabba (5.5-5.8 Ma), show variations in their teeth, with Ar. r. kadabba and Ar. ramidus sharing some similarities, and Au. anamensis and Au. afarensis others. The shift between the two sets of common dentition can be explained by either gradual changes in a single lineage over about 2.5 to 3.0 Ma, or a sudden speciation event, perhaps around 4.5 Ma. The lack of overlap favours the first hypothesis. Complicating factors are rife, however, for there may have been migrations (Ar. Ramidus is known from far to the south in Kenya), and yet more evidence will undubtedly be found from the vast amount of sediment of this age in the Afar Depression.

See also: Dalton, R. 2006. Feel it in your bones. Nature, v. 440, p. 1100-1101.

Palaeodentistry

Those of a nervous disposition should not read this item.

A 7500 to 9000 year-old Neolithic graveyard in Pakistan has yielded remains of about 300 people who cultivated wheat, barley and cotton, and herded cattle. There is nothing remarkable in that, except that nine individuals have teeth that have clearly been drilled neatly (Coppa, A. et al. 2006. Nature, v. 440, p. 755). The holes are between 1-3 mm in diameter and up to 3.5 mm deep, and would have exposed sensitive parts of the tooth. In excavations of the nearby village of Merhgarh are found tiny flint drill heads associated with beads of various ornamental materials. The drills are of the same size as the tooth holes. Quite probably, miniature bow-drills tipped with flint would have been used by Neolithic dentists for at least 1500 years – there is no evidence for tooth drilling from younger cemeteries in the area, despite abundant evidence of dental decay. Experiments show that such drills would take less than a minute to produce the neat holes, probably wielded by jewellers rather than dentists.

Asian Homo erectus skilled in tool making

The 1.8 Ma emigrants from Africa who first populated the Far East have not been regarded as having been especially inventive. While their ‘cousins’ in Africa developed the aesthetically stunning bi-face axe about 1.6 to 1.4 Ma ago (the first instance of visualising a finished object within a rough piece of raw material), H. erectus in East Asia is associated with the most primitive stone tools made by simply breaking flinty stones. That seemed to have been the extent of their stone-using skills up to their final demise about 20 thousand years ago –not a lot of progress in 1.8 million years. A report in March at the Indo-Pacific Prehistory Association Congress (Manila) of yet to be published work by Harry Widianto of Indonesia’s National centre of Archaeology may force a revision of this less than charitable view of early Asians (Stone, R. 2006. Java Man’s first tools. Science, v. 312, p. 361). In the Solo district of Java, made famous by Renée Dubois who found the first fossils of H. erectus there, a wealth of finely worked flake tools has been discovered in sediments that are about 1.6 Ma old. Most are small and made from blood-red to beige, translucent chalcedony. It seems that necessity was the mother of invention in this case, because suitable materials for sharp tools are very scarce in Java.

Exploration for water on the Moon

There is a grim determination at NASA, and in the current US presidential administration that funds it, to get back to and stay on the Moon. Of course, it would be absurdly costly to ship out all the necessities for survival beyond a few days, the weightiest item being water. Protected by the frigid permanent shadows inside craters near the lunar poles, there may be some very old ice there (see Puffing up the Moon in April 2006 issue of EPN). NASA intends to crash a two-tonne spent rocket stage from a planned pre-landing mission into Shackleton crater, hoping to detect water vapour in the debris plume thrown up by the impact. Once the surveying satellite carried by the mission has done its job, that too is going to be crashed in the hunt for what is clearly more precious than gold for would be lunar colonisers.

Source: News in Brief. Nature, v. 440, p. 858.

Mineral mapping and the history of Mars’ rocks and water

The principal mineral and rock mapping tool for Mars is the Observatoire pour la Minéralogie, l’Eau, les Glaces, at l’Activité. OMEGA is every remote sensing geologist’s dream machine, because its coverage of the short-wave end of electromagnetic radiation by 350 narrow bands can match spectra reflected from rocks and soils with those measured under laboratory conditions for several hundred important minerals. For over 18 months it has been steadily building up mineralogical maps of the Martian surface in a series of narrow swathes would round the planet in the manner of wool in a ball (see Mineral maps of Mars in April 2005 issue of EPN for early results). The 90% complete data, combined with dating of surface regions from crater counts and other means of stratigraphic analysis, is beginning to chart the history of the Martian surface in familiar terms of geology and the effects of water (Bibrin, J-P, and a great many others in the OMEGA team 2006. Global mineralogical and aqueous Mars history derived from OMEGA/Mars Express data. Science, v. 312, p. 400-404).

An interesting correlation is emerging. Where Mars’s surface is dominated by large amounts of pyroxene – the stratigraphically older regions of heavily cratered volcanic rocks – there is evidence of hydrated clay minerals (products of non-acid water alteration) and sulfates (formed by acid, hydrous alteration). The younger, brighter regions, which probably formed by surface processes after about 3.5 Ga, are dominated by anhydrous iron(III) oxides that give Mars its overall red colour. Although on Earth this hematite commonly forms by dehydration of iron(III) hydroxide or goethite, there is no sign of relic goethite on Mars. The authors attribute the red-staining hematite to direct oxidation of iron-rich silicates, without the role of water. It seems that in terms of surface processes, water played a role in the very earliest weathering to form clays. For a while conditions became acidic by the oxidative breakdown of igneous sulfides, thereby encouraging the formation of sulfate encrustations and sediments. This ‘wet’ phase may well have involved water vapour emanating from early, huge volcanoes. Once global volcanism became extinguished the supply of water was shut off, and since 3.5 Ga the planet has been hyper-arid. Hydrated minerals above the 5% level are not common on Mars, and if they did in fact encourage some life forms to emerge, the search for them can be finely focused by the OMEGA results.