Month: December 2020

Thawing permafrost, release of carbon and the role of iron

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Projected shrinkage of permanently frozen ground i around the Arctic Ocean over the next 60 years

Global warming is clearly happening. The crucial question is ‘How bad can it get?’ Most pundits focus on the capacity of the globalised economy to cut carbon emissions – mainly CO2 from fossil fuel burning and methane emissions by commercial livestock herds. Can they be reduced in time to reverse the increase in global mean surface temperature that has already taken place and those that lie ahead? Every now and then there is mention of the importance of natural means of drawing down greenhouse gases: plant more trees; preserve and encourage wetlands and their accumulation of peat and so on. For several months of the Northern Hemisphere summer the planet’s largest bogs actively sequester carbon in the form of dead vegetation. For the rest of the year they are frozen stiff. Muskeg and tundra form a band across the alluvial plains of great rivers that drain North America and Eurasia towards the Arctic Ocean. The seasonal bogs lie above sediments deposited in earlier river basins and swamps that have remained permanently frozen since the last glacial period. Such permafrost begins at just a few metres below the surface at high latitudes down to as much as a kilometre, becoming deeper, thinner and more patchy until it disappears south of about 60°N except in mountainous areas. Permafrost is melting relentlessly, sometimes with spectacular results broadly known as thermokarst that involves surface collapse, mudslides and erosion by summer meltwater.

Thawing permafrost in Siberia and associated collapse structures

Permafrost is a good preserver of organic material, as shown by the almost perfect remains of mammoths and other animals that have been found where rivers have eroded their frozen banks. The latest spectacular find is a mummified wolf pup unearthed by a gold prospector from 57 ka-old permafrost in the Yukon, Canada. She was probably buried when a wolf den collapsed. Thawing exposes buried carbonaceous material to processes that release CO2­, as does the drying-out of peat in more temperate climes. It has long been known that the vast reserves of carbon preserved in frozen ground and in gas hydrate in sea-floor sediments present an immense danger of accelerated greenhouse conditions should permafrost thaw quickly and deep seawater heats up; the first is certainly starting to happen in boreal North America and Eurasia. Research into Arctic soils had suggested that there is a potential mitigating factor. Iron-3 oxides and hydroxides, the colorants of soils that overlie permafrost, have chemical properties that allow them to trap carbon, in much the same way that they trap arsenic by adsorption on the surface of their molecular structure (see: Screening for arsenic contamination, September 2008).

But, as in the case of arsenic, mineralogical trapping of carbon and its protection from oxidation to CO2 can be thwarted by bacterial action (Patzner, M.S. and 10 others 2020. Iron mineral dissolution releases iron and associated organic carbon during permafrost thaw. Nature Communications, v. 11, article 6329; DOI: 10.1038/s41467-020-20102-6). Monique Patzner of the University of Tuebingen, Germany, and her colleagues from Germany, Denmark, the UK and the US have studied peaty soils overlying permafrost in Sweden that occurs north of the Arctic Circle. Their mineralogical and biological findings came from cores driven through the different layers above deep permafrost. In the layer immediately above permanently frozen ground the binding of carbon to iron-3 minerals certainly does occur. However, at higher levels that show evidence of longer periods of thawing there is an increase of reduced iron-2 dissolved in the soil water along with more dissolved organic carbon – i.e. carbon prone to oxidation to carbon dioxide. Also, biogenic methane – a more powerful greenhouse gas – increases in the more waterlogged upper sediments. Among the active bacteria are varieties whose metabolism involves the reduction of insoluble iron in ferric oxyhdroxide minerals to the soluble ferrous form (iron-2). As in the case of arsenic contamination of groundwater, the adsorbed contents of iron oxyhydroxides are being released as a result of powerful reducing conditions.

Applying their results to the entire permafrost inventory at high northern latitudes, the team predicts a worrying scenario. Initial thawing can indeed lock-in up to tens of billion tonnes of carbon once preserved in permafrost, yet this amounts to only a fifth of the carbon present in the surface-to-permafrost layer of thawing, at best. In itself, the trapped carbon is equivalent to between 2 to 5 times the annual anthropogenic release of carbon by burning fossil fuels. Nevertheless, it is destined by reductive dissolution of its host minerals to be emitted eventually, if thawing continues. This adds to the even vaster potential releases of greenhouse gases in the form of biogenic methane from waterlogged ground. However, there is some evidence to the contrary. During the deglaciation between 15 to 8 thousand years ago – except for the thousand years of the Younger Dryas cold episode – land-surface temperatures rose far more rapidly than happening at present. A study of carbon isotopes in air trapped as bubbles in Antarctic ice suggests that methane emissions from organic carbon exposed to bacterial action by thawing permafrost were much lower than claimed by Patzner et al. for present-day, slower thawing (see: Old carbon reservoirs unlikely to cause massive greenhouse gas release, study finds. Science Daily, 20 February 2020) – as were those released by breakdown of submarine gas hydrates.

Origin of life: some news

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For self-replicating cells to form there are two essential precursors: water and simple compounds based on the elements carbon, hydrogen, oxygen and nitrogen (CHON). Hydrogen is not a problem, being by far the most abundant element in the universe. Carbon, oxygen and nitrogen form in the cores of stars through nuclear fusion of hydrogen and helium. These elemental building blocks need to be delivered through supernova explosions, ultimately to where water can exist in liquid form to undergo reactions that culminate in living cells. That is only possible on solid bodies that lie at just the right distance from a star to support average surface temperatures that are between the freezing and boiling points of water. Most important is that such a planet in the ‘Goldilocks Zone’ has sufficient mass for its gravity to retain water. Surface water evaporates to some extent to contribute vapour to the atmosphere. Exposed to ultraviolet radiation H2O vapour dissociates into molecular hydrogen and water, which can be lost to space if a planet’s escape velocity is less than the thermal vibration of such gas molecules. Such photo-dissociation and diffusion into outer space may have caused Mars to lose more hydrogen in this way than oxygen, to leave its surface dry but rich in reddish iron oxides.

Despite liquid water being essential for the origin of planetary life it is a mixed blessing for key molecules that support biology. This ‘water paradox’ stems from water molecules attacking and breaking the chemical connections that string together the complex chains of proteins and nucleic acids (RNA and DNA). Living cells resolve the paradox by limiting the circulation of liquid water within them by being largely filled with a gel that holds the key molecules together, rather than being bags of water as has been commonly imagined. That notion stemmed from the idea of a ‘primordial soup’, popularised by Darwin and his early followers, which is now preserved in cells’ cytoplasm. That is now known to be wrong and, in any case, the chemistry simply would not work, either in a ‘warm, little pond’ or close to a deep sea hydrothermal vent, because the molecular chains would be broken as soon as they formed. Modern evolutionary biochemists suggest that much of the chemistry leading to living cells must have taken place in environments that were sometimes dry and sometimes wet; ephemeral puddles on land. Science journalist Michael Marshall has just published an easily read, open-source essay on this vexing yet vital issue in Nature (Marshall, M. 2020. The Water Paradox and the Origins of Life. Nature, v. 588, p. 210-213; DOI: 10.1038/d41586-020-03461-4). If you are interested, click on the link to read Marshall’s account of current origins-of-life research into the role of endlessly repeated wet-dry cycles on the early Earth’s surface. Fascinating reading as the experiments take the matter far beyond the spontaneous formation of the amino acid glycine found by Stanley Miller when he passed sparks through methane, ammonia and hydrogen in his famous 1953 experiment at the University of Chicago. Marshall was spurred to write in advance of NASA’s Perseverance Mission landing on Mars in February 2021. The Perseverance rover aims to test the new hypotheses in a series of lake sediments that appear to have been deposited by wet-dry cycles  in a small Martian impact crater (Jezero Crater) early in the planet’s history when surface water was present.

Crystals of hexamethylenetetramine (Credit: r/chemistry, Reddit)

That CHON and simple compounds made from them are aplenty in interstellar gas and dust clouds has been known since the development of means of analysing the light spectra from them. The organic chemistry of carbonaceous meteorites is also well known; they even smell of hydrocarbons. Accretion of these primitive materials during planet formation is fine as far as providing feedstock for life-forming processes on physically suitable planets. But how did CHON get from giant molecular clouds into such planetesimals. An odd-sounding organic compound – hexamethylenetetramine ((CH2)6N4), or HMT – formed industrially by combining formaldehyde (CH2O) and ammonia (NH3) – was initially synthesised in the late 19th century as an antiseptic to tackle UTIs and is now used as a solid fuel for lightweight camping stoves, as well as much else besides. HMT has a potentially interesting role to play in the origin of life.  Experiments aimed at investigating what happens when starlight and thermal radiation pervade interstellar gas clouds to interact with simple CHON molecules, such as ammonia, formaldehyde, methanol and water, yielded up to 60% by mass of HMT.

The structure of HMT is a sort of cage, so that crystals form large fluffy aggregates, instead of the gases from which it can be formed in deep space. Together with interstellar silicate dusts, such sail-like structures could accrete into planetesimals in nebular star nurseries under the influence of  gravity and light pressure. Geochemists from several Japanese institutions and NASA have, for the first time, found HMT in three carbonaceous chondrites, albeit at very low concentrations – parts per billion (Y. Oba et al. 2020. Extraterrestrial hexamethylenetetramine in meteorites — a precursor of prebiotic chemistry in the inner Solar System. Nature Communications, v. 11, article 6243; DOI: 10.1038/s41467-020-20038-x). Once concentrated in planetesimals – the parents of meteorites when they are smashed by collisions – HMT can perform the useful chemical ‘trick’ of breaking down once again to very simple CHON compounds when warmed. At close quarters such organic precursors can engage in polymerising reactions whose end products could be the far more complex sugars and amino acid chains that are the characteristic CHON compounds of carbonaceous chondrites. Yasuhiro Oba and colleagues may have found the missing link between interstellar space, planet formation and the synthesis of life through the mechanisms that resolve the ‘water paradox’ outlined by Michael Marshall.

See also: Scientists Find Precursor of Prebiotic Chemistry in Three Meteorites (Sci-news, 8 December 2020.)

 

How like the Neanderthals are we?

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An actor made-up to resemble a Neanderthal man in a business suit traveling on the London Underground. (Source: screen-grab from BBC2 Neanderthals – Meet Your Ancestors)

In the most basic, genetic sense, we were sufficiently alike for us to have interbred with them regularly and possibly wherever the two human groups met. As a result the genomes of all modern humans contain snips derived from Neanderthals (see: Everyone now has their Inner Neanderthal; February 2020). East Asian people also carry some Denisovan genes as do the original people of Australasia and the first Americans. Those very facts suggest that members of each group did not find individuals from others especially repellent as potential sexual partners! But that covers only a tiny part of what constitutes culture. There is archaeological evidence that Neanderthals and modern humans made similar tools. Both had the skills to make bi-faced ‘hand axes’ before they even met around 45 to 40 ka ago.  A cave (La Grotte des Fées) near Châtelperron to the west of the French Alps that was occupied by Neanderthals until about 40 ka yielded a selection of stone tools, including blades, known as the Châtelperronian culture, which indicates a major breakthrough in technology by their makers. It is sufficiently similar to the stone industry of anatomically modern humans (AMH) who, around that time, first migrated into Europe from the east (Aurignacian) to pose a conundrum: Did the Neanderthals copy Aurignacian techniques when they met AMH, or vice versa? Making blades by splitting large flint cores is achieved by striking the cores with just a couple of blows with a softer tool. At the very least Neanderthals had the intellectual capacity to learn this very difficult skill, but they may have invented it (see: Disputes in the cavern; June 2012). Then there is growing evidence for artistic abilities among Neanderthals, and even Homo erectus gets a look-in (see: Sophisticated Neanderthal art now established; February 2018).

Reconstructed burial of a Neanderthal individual at La Chappelle-aux-Saints (Credit: Musée de La Chapelle-aux-Saints, Corrèze, France)

For a long time, a pervasive aspect of AMH culture has been ritual. Indeed much early art may be have been bound up with ritualistic social practices, as it has been in historic times. A persuasive hint at Neanderthal ritual lies in the peculiar structures – dated at 177 ka – found far from the light of day in the Bruniquel Cave in south-western France (see: Breaking news: Cave structures made by Neanderthals; May 2016). They comprise circles fashioned from broken-off stalactites, and fires seem to have been lit in them. The most enduring rituals among anatomically modern humans have been those surrounding death: we bury our dead, thereby preserving them, in a variety of ways and ‘send them off’ with grave goods or even by burning them and putting the ashes in a pot. A Neanderthal skeleton (dated at 50 ka) found in a cave at La Chappelle-aux-Saints appears to have been buried and made safe from scavengers and erosion. There are even older Neanderthal graves (90 to 100 ka) at Quafzeh in Palestine and Shanidar in Iraq, where numerous individuals, including a mother and child, had been interred. Some are associated with possible grave goods, such as pieces of red ochre (hematite) pigment, animal body parts and even pollen that suggests flowers had been scattered on the remains. The possibility of deliberate offerings or tributes and even the notion of burial have met with scepticism among some palaeoanthropologists. One reason for the scientific caution is that many of the finds were excavated long before the rigour of modern archaeological protocols

Recently a multidisciplinary team involving scientists from France, Belgium, Italy, Germany, Spain and Denmark exhaustively analysed the context and remains of a Neanderthal child found in the La Ferrassie cave (Dordogne region of France) in the early 1970s  (Balzeau, A. and 13 others 2020. Pluridisciplinary evidence for burial for the La Ferrassie 8 Neandertal child. Scientific Reports, v. 10, article 21230; DOI: 10.1038/s41598-020-77611-z). Estimated to have been about 2 years old, the child is anatomically complete. Bones of other animals found in the same deposit were less-well preserved than those of the child, adding weight to the hypothesis that a body, rather than bones, had been buried soon after death. Luminescence dating of the sediments enveloping the skeleton is considerably older than the radiocarbon age of one of the child’s bones. That is difficult to explain other than by deliberate burial. It is almost certain that a pit had been dug and the child placed in it, to be covered in sediment. The skeleton was oriented E-W, with the head towards the east. Remarkably, other Neanderthal remains at the La Ferrassie site also have heads to the east of the rest of their bones, suggesting perhaps a common practice of orientation relative to sunrise and sunset.

It is slowly dawning on palaeoanthropologists that Neanderthal culture and cognitive capacity were not greatly different from those of anatomically modern humans. That similar beings to ourselves disappeared from the archaeological record within a few thousand years of the first appearance of AMH in Europe has long been attributed to what can be summarised as the Neanderthals being ‘second best’ in many ways. That may not have been the case. Since the last glaciation something similar has happened twice in Europe, which analysis of ancient DNA has documented in far more detail than the disappearance of the Neanderthals. Mesolithic hunter-gatherers were followed by early Neolithic farmers with genetic affinities to living people in Northern Anatolia in Turkey – the region where growing crops began. The DNA record from human remains with Neolithic ages shows no sign of genomes with a clear Mesolithic signature, yet some of the genetic features of these hunter-gatherers still remain in the genomes of modern Europeans. Similarly, ancient DNA recovered from Bronze Age human bones suggests almost complete replacement of the Neolithic inhabitants by people who introduced metallurgy, a horse-centred culture and a new kind of ceramic – the Bell Beaker. This genetic group is known as the Yamnaya, whose origins lie in the steppe of modern Ukraine and European Russia. In this Neolithic-Bronze Age population transition the earlier genomes disappear from the ancient DNA record. Yet Europeans still carry traces of that earlier genetic heritage. The explanation now accepted by both geneticists and archaeologists is that both events involved assimilation and merging through interbreeding. That seems just as applicable to the ‘disappearance’ of the Neanderthals

See also: Neanderthals buried their dead: New evidence (Science Daily, 9 December 2020)

Doggerland and the Storegga tsunami

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Britain is only an island when sea level stands high; i.e. during interglacial conditions. Since the last ice age global sea level have risen by about 130 m as the great northern ice sheets slowly melted. That Britain could oscillate between being part of Europe and a large archipelago as a result of major climatic cycles dates back only to between 450 and 240 ka ago. Previously it was a permanent part of what is now Europe, as befits its geological identity, joined to it by a low ridge buttressed by Chalk across the Dover Strait/Pas de Calais. All that remains of that are the white cliffs on either side. The drainage of what became the Thames, Seine and Rhine passed to the Atlantic in a much larger rive system that flowed down the axis of the Channel. Each time an ice age ended the ridge acted as a dam for glacial meltwater to form a large lake in what is now the southern North Sea. While continuous glaciers across the northern North Sea persisted the lake remained, but erosion during interglacials steadily wore down the ridge. About 450 ka ago it was low enough for this pro-glacial lake to spill across it in a catastrophic flood that began the separation. Several repeats occurred until the ridge was finally breached (See: When Britain first left Europe; September 2007). Yet sufficient remained that the link reappeared when sea level fell. What remains at present is a system of shallows and sandbanks, the largest of which is the Dogger Bank roughly halfway between Newcastle and Denmark. Consequently the swamps and river systems that immediately followed the last ice age have become known collectively as Doggerland.

The shrinkage of Doggerland since 16,000 BCE (Credit: Europe’s Lost Frontiers Project, University of Bradford)

Dredging of the southern North Sea for sand and gravel frequently brings both the bones of land mammals and the tools of Stone Age hunters to light – one fossil was a skull fragment of a Neanderthal. At the end of the Younger Dryas (~11.7 ka) Doggerland was populated and became a route for Mesolithic hunter-gatherers to cross from Europe to Britain and become transient and then permanent inhabitants. Melting of the northern ice sheets was slow and so was the pace of sea-level rise. A continuous passage across Dogger Land  remained even as it shrank. Only when the sea surface reached about 20 m below its current level was the land corridor breached bay what is now the Dover Strait, although low islands, including the Dogger Bank, littered the growing seaway. A new study examines the fate of Doggerland and its people during its final stage (Walker, J. et al. 2020. A great wave: the Storegga tsunami and the end of Doggerland? Antiquity, v. 94, p. 1409-1425; DOI: 10.15184/aqy.2020.49).

James Walker and colleagues at the University of Bradford, UK, and co-workers from the universities of Tartu, Estonia, Wales Trinity Saint David and St Andrews, UK, focus on one devastating event during Doggerland’s slow shrinkage and inundation. This took place around 8.2 ka ago, during the collapse of a section of the Norwegian continental edge. Known as the Storegga Slides (storegga means great edge in Norse), three submarine debris flows shifted 3500 km3 of sediment to blanket 80 thousand km2 of the Norwegian Sea floor, reaching more than half way to Iceland.  Tsunami deposits related to these events occur along the coast western Norway, on the Shetlands and the shoreline of eastern Scotland. They lie between 3 and 20 m above modern sea level, but allowing for the lower sea level at the time the ‘run-up’ probably reached as high as 35 m: more than the maximum of both the 26 December 2004 Indian Ocean tsunami and that in NW Japan on 11 March 2011. Two Mesolithic archaeological sites definitely lie beneath the tsunami deposit, one close to the source of the slid, another near Inverness, Scotland. At the time part of the Dogger Bank still lay above the sea, as did a wide coastal plain and offshore islands along England’s east coast. This catastrophic event was a little later than a sudden cooling event in the Northern Hemisphere. Any Mesolithic people living on what was left of Doggerland would not have survived. But quite possibly they may already have left as the climate cooled substantially

A seabed drilling programme financed by the EU targeted what lies beneath more recent sediments on the Dogger Bank and off the embayment known as The Wash of Eastern England. Some of the cores contain tsunamis deposits, one having been analysed in detail in a separate paper (Gaffney, V. and 24 others 2020. Multi-Proxy Characterisation of the Storegga Tsunami and Its Impact on the Early Holocene Landscapes of the Southern North Sea. Geosciences, v. 10, online; DOI: 10.3390/geosciences10070270). The tsunami washed across an estuarine mudflat into an area of meadowland with oak and hazel woodland, which may have absorbed much of its energy. Environmental DNA analysis suggests that this relic of Doggerland was roamed by bear, wild boar and ruminants. The authors also found evidence that the tsunamis had been guided by pre-existing topography, such as the river channel of what is now the River Great Ouse. Yet they found no evidence of human occupation. Together with other researchers, the University of Bradford’s Lost Frontiers Project have produced sufficient detail about Doggerland to contemplate looking for Mesolithic sites in the excavations for offshore wind farms.

See also: Addley, E. 2020.  Study finds indications of life on Doggerland after devastating tsunamis. (The Guardian, 1 December 2020); Europe’s Lost Frontiers website