Author: zooks777

Former Senior Lecturer at British Open University, research in remote sensing of arid lands, groundwater exploration, Precambrian tectonics and geochemistry

Record of rising Holocene sea-level in the tropics

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Areas beyond the zones of isostatic depression by ice-loading and recovery during glacial-interglacial cycles passively undergo sea-level fall and inundation. They best record the progress of Holocene ice-sheet melting and sea-level rise since 11.5 ka, especially if they are tectonically stable. The island state of Singapore, 1.5 º north of the Equator, is a near-ideal place for study (Bird, M.I. et al. 2010. Punctuated eustatic sea-level rise in the early mid-Holocene. Geology, v. 38, p. 803-806). The Australian and British geoscientists analysed a core through sediments in a mangrove swamp now just below sea level. The top 14 m penetrated a uniform though laminated sequence of marine muds, calibrated to time by radiocarbon dating of mollusc shells, mainly focused on the period from 9 to 6 ka period that the global oxygen-isotope record of ice volume suggests to have been the main period of final melting after the Younger Dryas.

Sedimentation was very rapid (~1 cm y-1) from  8.5 to 7.8 ka, probably as sea level rose too rapidly for the coast to be protected by mangrove growth.  Then for 400 years it slackened off to ~0.1 cm y-1 to rise again to 0.5 cm y-1 by 6.5 ka. The last date is the time of the mid-Holocene sea level highstand, after which sedimentation rate soon declined to 0.05 cm y-1, when mangroves became established at the site. Stable isotopes of carbon in the core (δ13C) show how the relative input of marine and terrestrial (mainly mangroves) organisms shifted over the period and are a proxy for the distance to the coastline and hence sea level. From 8.5 to 6.5 ka this was erratic from a starting point about 10 m lower than nowadays, showing rapid rises and falls that culminated in a sea level in Singapore about 3 m above present during the mid-Holocene sea level highstand that slowly declined to that of the present.

The team’s findings tally with evidence for the melting record of the North American ice sheet. An interesting aspect is that they also cover the period when rice cultivation in swampy areas of SE Asia got underway (~7.7 ka). Very rapid sedimentation would have encouraged development of the substrate for the highly fertile delta plains that now support the largest regional population densities on Earth. In turn they culminated in a series of early south and east Asian civilisations based on class societies.

Correction to marine biodiversity record and mass extinctions

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The mainstay of geobiologists’ efforts to chart the timing and pace of mass extinctions and diversification since 1997 has been the monumental collation of information in fossil collections undertaken by the late Jack Sepkoski from the 1980s until shortly before his death in 1999. It was his plotting of marine fossil genera numbers against their time ranges that first quantified the ‘Big Five’ and lesser mass extinctions, and the course of re-diversification that followed in their wake. One problem that Sepkoski was unable to account for was the inherent biases in collections: under-representation of earlier genera than younger ones; different representation from different areas partly because developed-world collections are larger than those from the majority world and partly because modern diversity changes with latitude; and varying preservation of less-substantial organisms. Well aware of the shortcomings of his initial compilations, Sepkoski with others set up the Palaeobiology Database (PBDB) that now encompasses almost 100 thousand collections. Sadly, Sepkoski did not live to analyse this record with statistical methods that lessen the influence of bias, but one of his successors has done just that (Alroy, J. The shifting balance of diversity among major marine animal groups. Science, v. 329, p. 1191-1194). Alroy’s approach sets out to represent the rare with a fair weighting relative to common groups of organisms, using a complex multivariate method called ‘shareholder’ sampling, which corrects some of the artefacts in Sepkoski’s work and earlier manipulation of the PBDB.
One important feature is that Alroy’s method does not assume that all groups follow the same ‘rules’ of diversification and adaptive radiation, particularly after mass extinctions. The upshot is a history with ups and downs, but not such a prominent growth in diversity in the late-Mesozoic and Cenozoic Eras as that in Sepkoski’s original compilation, although life did become richer. For someone, like me, who has not followed the developments since Sepkoski’s original work, there is another significant difference. There are 7 or 8 significant falls in diversity rather than 5. The Triassic-Jurassic boundary no longer shows a mass extinction, but the opposite. Major extinctions show up for the mid-Carboniferous, mid- and end-Jurassic and the Oligocene, where none were especially noticeable in the original plots by Sepkoski. Finally diversity peaks in the Siluro-Devonian and the Permian figure as prominently as that of the late-Cretaceous. Clearly, rules are few and one that was almost an assumption, that diversification of marine life after mass extinctions was exponential, is no longer borne out. Whether or not this new approach will bear fruit in refining or redefining the ecological dynamics that shaped and continue to shape life on Earth remains to be seen. It is tempting to be a bit cynical: is it all punctuated chaos (Bennett, K. 2010. The chaos theory of evolution. New Scientist, v. 208 (16 October 2010), p. 28-31)?

Comet impacts’ candidature for origin of life

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Most researchers concerned with the origin of life acknowledge that some preparatory organic chemicals would have been required, whose origin Darwin ascribed to a ‘warm, little pool’, and Haldane and Oparin to electrical discharges in the early atmosphere; both lines having been followed-up in practice by more recent scholars. A variety of biologically useful chemical ‘building blocks’ have also been recognised in comets, some meteorites – carbonaceous chondrites – and even in interstellar dust clouds. So one school looks to their supply from outside the Earth system. One possibility has had more scanty attention – the effects of impacts, as the power involved seems overwhelming for the survival of delicate organic molecules. Nir Goldman and his colleagues at the Lawrence Livermore National Laboratory in California have had a second look at this unlikely scenario (Goldman, N. et al. 2010. Synthesis of glycine-containing complexes in impacts of comets on early Earth. Nature Chemistry, v. 2, p. 949–954). Their approach has been to examine the implications of impact shock at likely collision speeds followed by post-shock expansion on mixtures of water, ammonia, carbon monoxide and dioxide, and methanol that are almost guaranteed in the make-up of most cometary ices. Their modelling suggests that carbon-nitrogen bonds form under shock conditions in long chain compounds. In the aftermath of huge collision shock the impact products undergo rapid expansion and cooling during which the chains can break down to simpler molecules, including some akin to amino acids such as glycene. The bombardment of Earth in the Hadean Eon (4.5-3.8 Ga) involved huge masses of material, almost certainly some delivered by icy comets that would have greatly increased the amount of water and the number of CHON compounds in the early Earth’s outer parts.

Phosphorus, Snowball Earth and origin of metazoans

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As any gardener knows, the element phosphorus is an essential plant nutrient or fertiliser, along with potassium and nitrogen plus a host of minor elements that are rarely mentioned as sufficient amounts are generally available in soils. The same necessities for life apply to oceans too, in which amounts vary a great deal from place to place and whose relative proportions have changed through geological time. For the oceans the main source of phosphorus is the continental crust, where the element resides mainly in the mineral apatite (Ca5(PO4)3(F,Cl,OH)). This is not an easily dissolved mineral, which is why for agricultural fertiliser it is generally made available in the soluble form of calcium superphosphate (Ca(H2PO4)2) that is produced by reaction between apatite and sulfuric acid. Since the land surface was colonised by plants about 450 Ma ago, biological processes made phosphorus more readily available to solution in river water by their break-down of apatite; supply by rivers to the ocean nowadays is of the order of 109 kg y-1. Ups and downs of P dissolved in ocean water though geological time would be expected to have influenced its overall biological productivity, controlled by photosynthetic phytoplankton and prokaryotes. Variations of carbon isotopes (δ13C) in organic and carbonate sediments are know to have occurred episodically since Archaean times, suggesting wide fluctuations in both bioproductivity and burial of dead organic matter. However, it has been hard to judge any geochemical reasons underpinning such variations. Since it is now clear that the common iron mineral goethite (FeOOH) ‘mops up’ many chemical species including phosphate ions by adsorption on its grain surfaces, measuring the P/Fe ratios in marine ironstones containing these minerals is a potential guide to the changing phosphorus concentration in the oceans (Planavsky, N.J. et al. 2010. The evolution of the marine phosphate reservoir. Nature, v. 467, p. 1088-1090).

The US-French-Canadian researchers charted P/Fe ratios in banded iron formations and ironstones precipitated around ocean-floor hydrothermal vents since the Archaean. What emerged were four episodes: from 2900 to 1700 Ma with generally low ratios; the Neoproterozoic from 750 to 635 Ma with much higher ratios; the Phanerozoic from Cambrian to Jurassic with low ratios and post-Cretaceous high ratios. There are several significant gaps in the record of ocean phosphate levels, notable one a billion years long from 750 to 1700 Ma. One factor that probably affected the variation is the way that dissolved silica (SiO2) drives down the proportion of phosphate adsorbing onto goethite. The rapid evolution and expansion since the Cretaceous of diatoms that secrete silica probably reduced SiO2 concentration in ocean water as their remains rained down to be buried on the ocean floor; that explains the high P/Fe ratios since about 100 Ma. Earlier Phanerozoic oceans are estimated to have had as much as seven times the present concentration of dissolved SiO2, thereby explaining the low values of P/Fe in ironstones deposited in the 100-540 Ma range. From 1700 to 3000 Ma the low P/Fe suggests oceanic phosphorus levels equivalent to those from the Jurassic to Cambrian (but perhaps up to 4 times that, depending on the poorly constrained SiO2 concentrations).

The Neoproterozoic phosphorus ‘spike’, at a time when dissolved SiO2 would have been no different from that in earlier times, suggests a massive influx of phosphate to the oceans at that time. It coincides with the two greatest glacial epochs the Earth has experienced: ‘Snowball’ Earth when glacial ice existed at tropic latitudes. In themselves the massive glaciations offer an explanation for high phosphorus delivery from the continents through glacial erosion and massive run-off during melting. More exciting is that the P/Fe ‘spike’ occurred at a time of massive perturbations in stable carbon isotopes ascribed to huge explosions of phytoplankton and organic carbon burial, which would have been permitted by high dissolved phosphate in the oceans. A large increase in primary biological productivity, i.e. photosynthesis, would have boosted oxygen levels; a necessity for the emergence of metazoan life forms soon after the end of ‘Snowball’ Earth conditions. But that begs the question of how glacially ground-up apatite, abundant as it would have been together with vast amounts of other rock debris, came to be dissolved. In today’s oceans crystalline apatite is barely soluble. It seems that apatite’s solubility decreases as temperature rises, and increases with pH – in alkaline conditions. As well as being cold, Neoproterozoic ocean water around the time of the ‘Snowball’ Earths was saturated with carbonate ions that helped thick, almost pure limestones to form globally after each glaciation. That spells alkaline conditions favouring phosphate solution. The authors speculate that global geochemical conditions during the Cryogenian Period (850-635 Ma) may have fostered the origin of the metazoans. Maybe, but their data have a billion-year gap immediately before that Period, and genomic molecular clocks suggest that the root metazoans emerged as much as half a billion years earlier.
See also: Filippelli, G.M. 2010. Phosphorus and the gust of fresh air. Nature, v. 467, p.1052-1053.

Threat to landscape from alien crayfish?

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Pacifastacus leniusculus 5
Image via Wikipedia

The stealthy invasion of rivers in Europe by the tasty American signal crayfish Pacifastacus leniusculus poses a threat not only to the indigenous European species Astacus astacus (P. leniusculus carries a fungal infection as well as being formidably armed), but conceivably to the very landscape itself (Johnson, M.F. et al. 2010. Topographic disturbance of subaqueous gravel substrates by signal crayfish (Pacifastacus leniusculus). Geomorphology, v. 123, p. 269-278). Johnson and colleagues from the University of Loughborough, UK used captive alien crayfish to model the effects of their bioturbation under controlled laboratory conditions, assessing their activity by the use of millimetre-resolution gravel-surface elevation data generated by a laser altimeter. The sturdy little beasts behave like frenzied bulldozers creating mounds and pits in the gravel substrate, displacing on average about 1.7 kg of gravel every day over an area of 1 m2 thereby completely disrupting the perfectly flat experimental substrate onto which they were introduced in about 3 days. By this activity they render the surface more prone to erosion by flowing water so that greater grain transport ensues; they could effect bother erosion and deposition by increasing transportation of grains. To my knowledge, this is the first experimental study of bioturbation in the context of hydrology. We can expect more now that the technology is available: the burrowers as well as the diggers of the animal world. While the Phanerozoic is best know for having begun with the Cambrian Explosion of multicellular life, a sometimes overlooked attribute is that it coincided with the start of bioturbation. That may well have had a profound effect on sediment transport as the American invader suggests.
See also: Newton, A. 2010. Crayfish at work. Nature Geoscience, v. 3, p. 592

Whizz-bang hypothesis for the Younger Dryas bites the dust

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Such has been the urge to leap on the impact theory of Earth system change, that virtually every drastic event recorded in the geological timescale has been linked by someone or other to the effects of bombardment by extraterrestrial objects. The most recent concerns the Younger Dryas and the extinction of the mammoths (see Whizz-bang view of Younger Dryas and Impact cause for Younger Dryas draws flak in EPN July 2007 and May 2008). The hypothesis stemmed from reports of an association of tiny magnetic spherules, soot and purported nanodiamonds and fullerenes (carbon molecules bonded into ‘geodesic’ spheres) with the onset of the Younger Dryas, the roughly coincident disappearance of Clovis tools and the demise of several large North American mammal species, including mammoths. Regular columnist for Science magazine, Richard Kerr, reports that independent searches for all the evidential materials at the sites where they were said to occur have drawn unrelieved blanks (Kerr, R.A. 2010. Mammoth-killer impact flunks out , Science, v. 329, p. 1140-1141). Nonetheless, the core supporters of the hypothesis are clinging to their guns.

Hard-core continental lithosphere

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The oldest and most stable parts of the continents are known as cratons, after the Greek word for strength κράτο (kratos). All the present continents have at least one craton (Africa and South America have 4 each, and Eurasia 6 or 7). Each has remained unaffected by major deformation for a billion years or more, even during continent-to-continent collisions in which they participated. Almost all cratons began to form during the Archaean Eon before 2500 Ma, but most became rigid long after. Several theories have been suggested to account for their durability, one commonly accepted being that somehow the crust ‘ripened’ so that most of the heat-producing radioactive isotopes of U, Th and K were moved by igneous and metamorphic processes to the uppermost crust, along with water; most cratons expose fragments of anhydrous granulites of tonalitic composition. These bear evidence of having formed at the base of the continental crust and have been heavily depleted in “granitophile” trace elements. As a result they cannot undergo partial melting under normal geothermal conditions and where they remain at great depth are much cooler than younger, deep crust. The other dominant feature of cratonic lithosphere is a mantle portion that is anomalously thick (sometimes down to 250 km); in some cases there is little if any sign of asthenosphere beneath such ‘keels’. Research on rocks brought up from the ‘roots’ of cratons by the kimberlite magmas famous for their diamonds points to that deep mantle itself having conferred great rigidity and thus longevity (Peslier, A.H. et al. 2010. Olivine water contents in the continental lithosphere and the longevity of cratons. Nature, v. 467, p. 78-81).

The presence of water in minerals that make up igneous and metamorphic rocks enables them to begin melting at lower temperatures than their dry equivalents, and also to behave in a more plastic fashion under stress. Anne Peslier of NASA in Houston and her US and German colleagues analysed the minerals in ultramafic mantle rocks dragged upwards by kimberlites that punched through the Kaapvaal craton in southern Africa long after it formed. The dominant mantle mineral is olivine (50-80%), generally thought of as anhydrous but typically containing a few hundred parts per million by weight. Olivines in the Kaapvaal mantle xenoliths become drier with increasing depth of their formation (determined from their mineralogy in which garnet is stable at the deepest levels). At depths around 150-250 km low water content in olivine makes it and the mantle itself 20 to 3000 times stronger than the asthenosphere, which protects it from the underlying flow associated with tectonic motions.

How such root zone of continents may have formed has been addressed by two papers on seismic structure beneath the best studied craton; that of the Canadian Shield (Yuan, H. & Romanowicz, B. 2010. Lithospheric layering in the North American craton. Nature, v. 466, p. 1063-1068; Miller, M.S. & Eaton, D.W. 2010. Formation of cratonic mantle keels by arc accretion: Evidence from S receiver functions. Geophysical Research Letters, v. 37, doi:10.1029/2010GL044366). In the first, Yuan and Romanowicz of the Berkeley Seismological Laboratory, California use a form of seismic tomography to map anisotropy in the mantle along transects that cross the ancient core of the North American continent. Their results chart the depth of the base of the lithosphere and also define two layers in the lithospheric mantle. The upper layer (down to 150 km) only occurs beneath the Archaean craton, and the top of the asthenosphere ranges from 100-240 km down: at its deepest beneath the craton. The sub-craton mantle they ascribe to chemical depletion of its upper part during early lithospheric evolution, and later addition of the less chemically evolved deeper layer. Miller and Eaton of the Universities of California USA and Calgary Canada used S-wave data from eight seismic stations extending from WSW to ENE over the western cordillera and the Canadian Shield to the Arctic islands of Canada. Their results show a similar variation in dept of the base of the lithosphere and resolve several roughly eastward-dipping boundaries in the sub-craton lithospheric mantle, which they link to Precambrian volcanic arcs preserved in the upper crust above them; i.e. suggesting that the upper layer in the first paper stems from a major episode of arc accretion that built the Canadian Shield.

Record of rising Holocene sea-level in the tropics

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Areas beyond the zones of isostatic depression by ice-loading and recovery during glacial-interglacial cycles passively undergo sea-level fall and inundation. They best record the progress of Holocene ice-sheet melting and sea-level rise since 11.5 ka, especially if they are tectonically stable. The island state of Singapore, 1.5 º north of the Equator, is a near-ideal place for study (Bird, M.I.et al. 2010. Punctuated eustatic sea-level rise in the early mid-Holocene.Geology, v. 38, p. 803-806). The Australian and British geoscientists analysed a core through sediments in a mangrove swamp now just below sea level. The top 14 m penetrated a uniform though laminated sequence of marine muds, calibrated to time by radiocarbon dating of mollusc shells, mainly focused on the period from 9 to 6 ka period that the global oxygen-isotope record of ice volume suggests to have been the main period of final melting after the Younger Dryas.

Sedimentation was very rapid (~1 cm y-1) from  8.5 to 7.8 ka, probably as sea level rose too rapidly for the coast to be protected by mangrove growth.  Then for 400 years it slackened off to ~0.1 cm y-1 to rise again to 0.5 cm y-1 by 6.5 ka. The last date is the time of the mid-Holocene sea level highstand, after which sedimentation rate soon declined to 0.05 cm y-1, when mangroves became established at the site. Stable isotopes of carbon in the core (δ13C) show how the relative input of marine and terrestrial (mainly mangroves) organisms shifted over the period and are a proxy for the distance to the coastline and hence sea level. From 8.5 to 6.5 ka this was erratic from a starting point about 10 m lower than nowadays, showing rapid rises and falls that culminated in a sea level in Singapore about 3 m above present during the mid-Holocene sea level highstand that slowly declined to that of the present.

The team’s findings tally with evidence for the melting record of the North American ice sheet. An interesting aspect is that they also cover the period when rice cultivation in swampy areas of SE Asia got underway (~7.7 ka). Very rapid sedimentation would have encouraged development of the substrate for the highly fertile delta plains that now support the largest regional population densities on Earth. In turn they culminated in a series of early south and east Asian civilisations based on class societies.

 

Antipodean glaciers confirm complementary southern Younger Dryas warming

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Studies of air-temperature proxies in cores from the Antarctic ice cap show a roughly mirrored climate record to that found in the Greenland ice. While the Northern Hemisphere underwent a sudden climate collapse into almost full-glacial conditions around 12.9 ka and an equally dramatic warming around 11.7 ka, Antarctica steadily warmed over the same period to reach full interglacial conditions by 11.5. That this climatic inversion reached relatively low southern latitudes is confirmed by a record of the changing size of glaciers on mountains in New Zealand’s South Island (Kaplan, M.R. and 9 others 2010. Glacier retreat in New Zealand during the Younger Dryas stadial. Nature, v. 467, p. 194-197). The US-New Zealand-Norwegian-French partnership used detailed geomorphological mapping, and cosmogenic isotope studies of exposed rock fragments to show that after about 13 ka glaciers retreated by more than a kilometre in the succeeding 1500 years in contrast to the dramatic glacial advances in northern areas such as the Scottish Highlands.

Sabotage in Science

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Scientists are supposedly objective but a recent case in Michigan USA sheds a worrying light on a dark reality of research. A former post-doctoral researcher at the Ann Arbor campus of the University of Michigan has been found guilty of changing the experimental results of a PhD student who worked in the same lab; the charge was malicious destruction of personal property, which in the USA usually means vandalism. The postdoc claims his otherwise inexplicable actions stemmed from internal pressures and that he intended to slow down the student’s work (Maher, B. 2010. Sabotage. Nature, v. 467, p. 516-518). At first the student believed that she was making mistakes herself, but then realised some unknown person had swapped labels on her samples. When she aired her suspicions she was told she was being paranoid and going through a bad patch in her studies. She persisted despite such resistance, until her supervisor alerted the university’s security officers. They launched an investigation into the student herself! After two interrogations and a lie-detector test, the university police installed cameras in the lab, which led to the culprit being caught red-handed.

Research misconduct is notoriously difficult to apprehend, institutional authorities often balk at clear evidence and end up in what amounts to a whitewash to protect the institution’s integrity. Daniele Fanelli of the University of Edinburgh UK has made a study of malpractice in science, ranging from this kind of willful derailing of a research project to withholding information and vindictive reviews that are rarely considered misconduct. She has found that up to 30% of scientists admit (anonymously) to lesser but still baleful issues, and a staggering 70% say they have witnessed deliberate damage to fellow researchers. This malice that dare not speak its name, even were it to be rarer than Famelli has discovered, is a blight that should be recognised by institutional authorities rather than ignored or actually turned against the complainants.