More Denisovan connections

In 2006 mining operations in NE Mongolia uncovered a human skull cap with prominent brow ridges. After having been dubbed Mongolanthropus because of its primitive appearance and then suggested to be either a Neanderthal of Homo erectus. Radiocarbon dating in 2019 then showed the woman to be around 34,500 years old and the accompanying sequencing of its mtDNA assigned her to a widespread Eurasian haplotype of modern humans. Powdered bone samples ended up in Svante Paabo’s renowned ancient-DNA lab at the Max Planck Institute for Evolutionary Anthropology in Leipzig and yielded a full genome (Massilani, D. and 14 others 2020. Denisovan ancestry and population history of early East Asians. Science, v. 370, p. 579-583; DOI: 10.1126/science.abc1166). From this flowed some interesting genetic history.

Skull cap of a female modern human from Salkhit in Outer Mongolia, which superficially resembles those of Homo erectus from Java (Credit: Massilani et al. Fig 1a; © Institute of Archaeology, Mongolian Academy of Sciences)

First was a close overall resemblance to living East Asians and Native Americans, similar to that of an older individual from near Beijing, China. This confirmed the antiquity of the East Eurasian population’s split from that of the west, yet contained evidence of some interbreeding with West Eurasians to the extent of sharing 25% of DNA and with Neanderthals. The two specimens also contained evidence of Denisovan ancestry in their genomes, but fragments that are more akin to those in living people in East Asia than to those of Papuans and Aboriginal Australians: these were definitely cosmopolitan people! The simplest explanation is two distinct minglings with Denisovans: that involving ancestors of Papuans and Australian being the perhaps earlier, en route to their arrival at least 60 thousand years on what became an island continent in the run-up to the last glacial maximum. Be that as it may, two separate Denisovan populations interbred with modern human bands. Further genetic connections with ancient Northern Siberian humans suggests complex movement across the continent, probably inevitable because these hunter-gatherers would have followed prey animals on their seasonal migrations, which would have been longer than today because of climatic cooling. The same can be surmised for Denisovans which would have increased the chances of contact

See also: Denisovan DNA in the genome of early East Asians (Science Daily, 29 October 2020)

In May 2019 (Denisovan on top of the world) I wrote about a human lower jaw that a Buddhist monk had found in a cave at a height of 3.3 km on the Tibetan plateau. Analysis of protein traces in the teeth it retained suggested that it was Denisovan. Like the earlier small remnants from Siberia, dating this putative Denisovan precisely proved to be impossible. The jawbone was at least 160 ka old from the age of speleothem carbonate encrusting it. Excavation of the sediment layers from Baishiya Cave has enabled a large team of Chinese, Australian, US and Swedish scientists to try out the ‘environmental DNA’ approach pioneered by the Max Planck Institute for Evolutionary Anthropology (see: Detecting the presence of hominins in ancient soil samples, April 2017). The cave confirmed occupation by Denisovans from mtDNA found in layers dated using radiocarbon and optically stimulated luminescence methods. Denisovan mtDNA turned up in four layers dated at ~100, ~60 and possibly as young as 45 ka, as well at that from a variety of other mammals (Zhang, D. and 26 others. Denisovan DNA in Late Pleistocene sediments from Baishiya Karst Cave on the Tibetan Plateau. Science, v. 370, p. 584-587; DOI: 10.1126/science.abb6320).  Denisovans were clearly able to live at high elevations for at least 100 thousand years: long enough to evolve the metabolic processes essential to sustain living in low-oxygen conditions, which it has been suggested was passed on to ancestral modern Tibetans.

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